| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2558 |
|---|
| Symbol | |
|---|
| ID | 4244860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 3953889 |
|---|
| End bp | 3954944 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638107632 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_722231 |
|---|
| Protein GI | 113476170 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA AAAATTATTT TTATGGTTTT GTTACTGCAT TAGTAATAGC ATTAGTAACT
AACTACCTGC TAAGTGCTAA TGCTCATACC CGACTATTTC AAAATTCTGT CTTTGAAAAT
TCTATTGCTC AGGTATCAAA TAATCCAAAA TTTGCTCTAC CTATTGAATG TAAGCTTGAC
AAAGACTGCT TTATTCTGTT GTATAGCGAT CGCGATCCTA GTCCGAAAGA ACTAGATTTT
GGTTGTGGCA GGCAAACTTA CGATGGTCAC AAAGGAACAG ATTTTGCTAT ACCTGATGAA
AAAATTATGG CACAAGGTGT AGCTGTGACA GCTGTGGCGC CTGGTAAAGT GCTACGAACC
AGAGACGGAA TACCAGATCG CCGAATAATA GATACAGCAG ATCGGGATGC GGTTAAGAAT
ATTGAATGTG GAAATGGAAT AGTCATAGAT CATGGTAATG GTTGGGAAGC TCAATACTGT
CATCTCCGTA ATGGTAGTGT TGTTGTGAAA CCAGGAACGG TTGTCAAAGC AGGTACTCAA
CTGGGAATAG TAGGAACATC TGGTTTATCT TCTTTTCCTC ATGTTCATTT AAGTGTTCGA
TATCAAGGAG AAATTGTAGA TCCATTTGTT GGAGTGAATG TTAAGAGTGG TTGTAATGTT
CCTCGTAATT CAATTTGGGA AGAACCGTTG AGTTATAAAC CAACTGGAAT TATTAGAAGT
GGGTTTGCTA CTGTTGCGCC AACTATGGAT GATTTGTGGT CTGGCAAATT TTACGATACT
GTTTTAGCAG GAAATAGTGC GGCATTAATA TTTTGGGTAC AAATTTATGG GGTTTTGCCT
GGGGATAAAG AACATTATCA ATTATTTGCT CCTAATGGTG AGGGGGTTAT AGACAATAAA
AAGGAAATGA AATCTGCTCA CAAGACATGG ATGGGGTATG TGGGTAAACG CAATAATTCT
CAGTCCCTTC CTATAGGTAA ATGGAGAGGT GAGTATAGTT TGACTAGAGG TGACCAAGTA
TTAGTAAATA TTACAAAAGA GGTTCAATTA AATTGA
|
|---|
| Protein sequence | MKLKNYFYGF VTALVIALVT NYLLSANAHT RLFQNSVFEN SIAQVSNNPK FALPIECKLD
KDCFILLYSD RDPSPKELDF GCGRQTYDGH KGTDFAIPDE KIMAQGVAVT AVAPGKVLRT
RDGIPDRRII DTADRDAVKN IECGNGIVID HGNGWEAQYC HLRNGSVVVK PGTVVKAGTQ
LGIVGTSGLS SFPHVHLSVR YQGEIVDPFV GVNVKSGCNV PRNSIWEEPL SYKPTGIIRS
GFATVAPTMD DLWSGKFYDT VLAGNSAALI FWVQIYGVLP GDKEHYQLFA PNGEGVIDNK
KEMKSAHKTW MGYVGKRNNS QSLPIGKWRG EYSLTRGDQV LVNITKEVQL N
|
|---|
| |