| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2535 |
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| Symbol | |
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| ID | 4245069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 3912586 |
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| End bp | 3914037 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638107611 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_722210 |
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| Protein GI | 113476149 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00293209 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.012093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGAAG CTCTTGCTGA CCGCTTAGAA GTGGCCTGGA AAAAACTAAG GGGTCAAGAC
AAAATAACAG ATTCTAATAT CCAACAAGCC CTGGGAGAAG TACGTCGAGC CCTGTTAGAG
GCAGACGTCA ACTTACAAGT TGTGAAAGGC TTTATAGCGG AAGTCAGCAG TAAGGCAAAA
GGAGCAGATG TATTAACAGG AGTAAGACCA GACCAACAGT TCATAAAAAT CGTCCATGAT
GAACTAGCGC AGATAATGGG AGAAAGTAAT GCTCCCCTAG CGAAAGCCGA CCAACCGCCA
ACTATTGTCC TGATGGCAGG TTTACAGGGA ACAGGAAAAA CCACAGCCTC AGCTAAGTTA
GCCTTACATT TAAGGAAAGA GAACCGGAGT GCTTTACTGG TAGCTACTGA TGTCTATAGA
CCGGCTGCTA TTGACCAGTT AGTTACCTTA GGAAAACAGA TAGATGTACC CGTATTTGAA
TTAGGTACAG ATATAGACCC TGTAGAAATT GCTCAGAAAG GGTTGGAAAA GGCCAAGGCA
GATGGTATAG ATATAGTAAT TATAGATACA GCAGGTCGGC TACAGATAGA CCAAGATATG
ATGGCAGAAC TTGCTAGAAT TAAAGCAGCA GTTAAGCCTC AAGAAACCTT GCTAGTAGTA
GATGCAATGA CAGGTCAAGA GGCTGCAACA TTGACCCGTA CCTTCAATGA TCAAATTGGG
ATAACAGGGG CGATCCTAAC TAAAATGGAC GGAGATACAA GAGGAGGGGC AGCTTTATCA
GTCCGTAGAA TTTCTGGTCA ACCGATAAAA TTTATAGGGG TGGGAGAAAA AGTAGAAGCC
CTACAACCTT TCTACCCAGA AAGGATGGCT TCTAGGATTT TGGGAATGGG AGATGTACTT
ACCCTGGTAG AAAAGGCTCA GGAAGAGTTT GACATAGCTG ATGCAGAAAA AATGCAGGAA
AAAATCCTCT CAGCTAAGTT TGACTTTACT GACTTCCTCA AGCAAACGCG ACTGATGAAG
AATATGGGTT CCTTGGGAGG AATTATGAAA TTAATTCCAG GAATGAATAA AATAAGTGAT
GATAAGTTGC AGCAGGGAGA AACTCAGCTA AAACGTTGTG AGTCTATGAT TAATTCTATG
ACGCGCCAAG AGCGCCAAAA TCCCGAACTT TTAGCGAAAT CTCCTTCCCG ACGACGACGC
ATTGCTGGTG GTTCAGGTTA TGCTGAGAAA GATGTGAGTA AACTAGTGAG TGACTTCCAA
AGAATGCGAT CGCTGATGCA GAAAATGGGC CAAGGCGATC TATCAGGGAT GGGGATGCCT
GGAATGCCTG GTATGGGAAT GCCTGGTATG CTAGGAGGTA AAGCACCTCC TGGTTGGCGT
AACCAGCAAA GTACGGGTAG CGGTAAAAAG AAAAAGAAGC AGAAAAAGAA AAAAGGCTTT
GGGCAGCTTT AA
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| Protein sequence | MFEALADRLE VAWKKLRGQD KITDSNIQQA LGEVRRALLE ADVNLQVVKG FIAEVSSKAK
GADVLTGVRP DQQFIKIVHD ELAQIMGESN APLAKADQPP TIVLMAGLQG TGKTTASAKL
ALHLRKENRS ALLVATDVYR PAAIDQLVTL GKQIDVPVFE LGTDIDPVEI AQKGLEKAKA
DGIDIVIIDT AGRLQIDQDM MAELARIKAA VKPQETLLVV DAMTGQEAAT LTRTFNDQIG
ITGAILTKMD GDTRGGAALS VRRISGQPIK FIGVGEKVEA LQPFYPERMA SRILGMGDVL
TLVEKAQEEF DIADAEKMQE KILSAKFDFT DFLKQTRLMK NMGSLGGIMK LIPGMNKISD
DKLQQGETQL KRCESMINSM TRQERQNPEL LAKSPSRRRR IAGGSGYAEK DVSKLVSDFQ
RMRSLMQKMG QGDLSGMGMP GMPGMGMPGM LGGKAPPGWR NQQSTGSGKK KKKQKKKKGF
GQL
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