Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2511 |
Symbol | |
ID | 4245046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3876821 |
End bp | 3878002 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638107591 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_722190 |
Protein GI | 113476129 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.783199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAATG TTCCCCCCCT AGATTTAACA CAACAGTATG AAATAATCAA AGAACAAGTA AATACTAGAG TTCAAGAGGT ACTTAGCTCT GGTCGTTATA TTGGCGGTTC TATTGTTGAT GAGTTTGAAC AAGAATTTGC TAAATACATA GATGTATCTC ATTGTGTATC CTGTAACTCT GGCACTGATG CTCTGTTTCT AGCTTTACGA GCTATGAATA TTGGGCTTGG GGATGAAGTA ATTACTACTC CTTTCACTTT TTTTGCTACT GCTGAAGTCA TTAGTGCAGT AGGAGCAACT CCAATTTTTA TTGACATTGA CCCCCAGACT TTTAACTTAG ATCTTCAAAA ACTTGAGCTA GCGATAACTG AAAAAACAAA AGCTATTTTG CCAGTACATT TATTTGGTCA ACCTTTAGAT ATGACACAGT TAATGGCGAT CGCTCGTGCC CACAATTTAA TAGTTATTGA AGACTGTGCC CAAGCTACAG GAGCAGAATG GCACCAGAAA AAAGTCGGGA GTTTTGGTGA TGTTGGTTGT TTTAGTTTTT TTCCTACTAA AAATTTAGGA GCTTTTGGAG ATGGGGGAGC TCTGACCACA AATAATGCAG CGATCGCTTC TCAAGCGCGA ATACTAAAAA ATCATGGACA GTCTGCCAAA TATTTTTCTC AAGACATTGG TATTAACAGT CGTCTAGATA CCATACAAGC TGCAATTCTG CAAATAAAAT TACCATTATT AGATAGTTGG AACGAACAAC GTCGTAAATT AGCAAATCAT TACCATAAAT TTTTTAGTAC TATAACTGCT GTAGTTCCTC CTCAAGAGTT ATCTGGAAGT AGATGTGTTT GGAATCAATA CACAATTATG CTTAAAAGTA AACAGTTAGA AACTACGACA AAATCTCATT TTTCTAATTA TTTGCGTGAT TTAGTTCATG ATAATTTACA AAATAGGGGA ATAGGTTCAG CGGTTTACTA TCCTACACCT TTACATTTAC AACCTGTTTA CAAATCTTTG GTAAACTATC AATTGCCAGT AGTAGAACAA GTGTGCCATC AGGTTTTGTC CTTGCCTATT TTTCCTGAAC TTTCCACTCC ACAACAAGAG CAAGTTATAT ATGCTTTGAA AGATTGTTTG CAAGAACTAA TGCCGAATCC ACCAAGAAGT CATAAATTAT AA
|
Protein sequence | MANVPPLDLT QQYEIIKEQV NTRVQEVLSS GRYIGGSIVD EFEQEFAKYI DVSHCVSCNS GTDALFLALR AMNIGLGDEV ITTPFTFFAT AEVISAVGAT PIFIDIDPQT FNLDLQKLEL AITEKTKAIL PVHLFGQPLD MTQLMAIARA HNLIVIEDCA QATGAEWHQK KVGSFGDVGC FSFFPTKNLG AFGDGGALTT NNAAIASQAR ILKNHGQSAK YFSQDIGINS RLDTIQAAIL QIKLPLLDSW NEQRRKLANH YHKFFSTITA VVPPQELSGS RCVWNQYTIM LKSKQLETTT KSHFSNYLRD LVHDNLQNRG IGSAVYYPTP LHLQPVYKSL VNYQLPVVEQ VCHQVLSLPI FPELSTPQQE QVIYALKDCL QELMPNPPRS HKL
|
| |