| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2499 |
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| Symbol | |
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| ID | 4245268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 3855819 |
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| End bp | 3857666 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638107580 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_722179 |
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| Protein GI | 113476118 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0730388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTTA CACAAATACC AGGGGTTTGT TCATTGAGAC TGATATTAAA TTTAATAGCT
ACTATTTCGA GAATTCATAC TTTTCATCTA TTGAAAGGGT TAACGTCCTT GCTATTAACC
TGTGATTATT TATCAATTTG GAAGAGCTTT AAGCAGTTTA CTAATAAAAT TTATCAGCTT
ATTCATTATA TTTATAAATT ACTTCAGCTC AACTCTGCCT TTTGGAAAAA GCTCAAGTCT
AAGGTGGATG ATGTTTTATC TAGTGGTCGA AAAAAGTTGA TTAAACTAAA TGAACAAGCT
ATAGATTCTT CTATGCAAAT TTATTATAAT GATAATAATG ATAATAATGA GGTAGCAAAG
CAGGTAATTG TTAAAAAGCT CAAGAAACAC AGACAAAAAC AAGCTACACT TTTATATAAG
GCATTTCACG ATGGGCTGAC GGGTTTACCA AACCGTAATT TGTTTTTTAA TGAACTAAAA
CTAGTTTTAC ATCAGTCTAG AAAAGACCTA AGTTATAAGT ATGGGGTTCT GTTTTTAGAT
CTAGATCGCT TTAAAGTAAT TAATGATAGT TTGGGGCATG TTATTGGAGA TCAAGTATTA
GTCATCATCA GCAGGCGACT ACAGAATTAT ATCAAAGCTT CAGATACTGT GGCGAGGTTA
GGAGGGGATG AGTTCACTAT CTTACTAAGG TCTCTACCCG ATGCTGACTA TGCTACTAAA
GTAGCTATGA AAATTAATCA AGAACTTGCT CAACCAATTT ATGTTGAAGG ACATGAAATA
TTTACTACAG TAAGTATTGG CATTGTTACT AATTGTAAAC AGTTTAGTGA TCAGCTCGGT
GAAAATAGTT TTCCTATTTG TCCTATTTAC AACCACCCAG AAGATGTACT GCGAGCTGCA
GATATTGCGA TGTATCGGGC TAAAGATTTA GGTAAGGCAA GGTATGAGGT GTTTGATTTG
ACAATGCACA GAGAAGTTGT ATCTTTATTA GAATTGGAAA ATGATCTACG ACGAGCTGTA
GAAATGATTA AACAAAATCC AGTAAATTCT CAGTTTTTTT TAAGTTACCA ACCAATTATT
TGTTTAACTA CAAATAAAAT TACTGGTTTT GAATGTTTGG TACGCTGGGC TCATCCTACT
AAAGGCTTAA TTCAACCAGG AAAGTTTATC CCATTGGCAG AAGAAACGGG TTTAATTATT
CCTCTAGGAA TGTGGATATT GCGAACGGCT TGTCATCAGT TGGCTGTTTG GCAGAAAAGG
TTGACAGGGA GACATGTTTG CTCTGGTTTG GCATATTCTG ACTGTAATTT TATTGCTCAT
AATTTTACTA TGAGTGTCAA TATTTCTAGC AAGAATATCT CACAACCAAA TTTTTTGGAA
CAAGTTAATG AAATTTTGGC GGCAACAAAT TGTCAACCTC ATTGTTTGAA TCTAGAAATT
ACTGAAAGTT TAATTATGAC AAATGTTGAT TTAGCTACTG CAGTTTTTGA GAAACTGAAA
AATCAAAATA TTAGATTATC AATAGATGAT TTTGGTACTG GTTATTCGTC GTTAAGTTAT
TTACATCAGT TTCCTATTAA TACTATTAAA ATTGACCGTT CTTTTGTGAG TCAATTAGAT
TCGGATACAA GCGGTCAAAC TTTAAAAATT GTGAGTGCTG TTATTGCATT GGCTAATAAT
TTAGATTTAG AAATAATTGC AGAAGGAATA GAAACTAAGG CTCAAATGAA TCAGCTCAAG
CAACTTAAGT GTCGCAAAGG ACAGGGGTAT TTTTTCTCAA AGCCATTGAC AACTTCCAGT
GTAAATGAAC TACTTCAGTT TACCTCACTA ACTAGTCCTT TTCTTTAA
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| Protein sequence | MIVTQIPGVC SLRLILNLIA TISRIHTFHL LKGLTSLLLT CDYLSIWKSF KQFTNKIYQL
IHYIYKLLQL NSAFWKKLKS KVDDVLSSGR KKLIKLNEQA IDSSMQIYYN DNNDNNEVAK
QVIVKKLKKH RQKQATLLYK AFHDGLTGLP NRNLFFNELK LVLHQSRKDL SYKYGVLFLD
LDRFKVINDS LGHVIGDQVL VIISRRLQNY IKASDTVARL GGDEFTILLR SLPDADYATK
VAMKINQELA QPIYVEGHEI FTTVSIGIVT NCKQFSDQLG ENSFPICPIY NHPEDVLRAA
DIAMYRAKDL GKARYEVFDL TMHREVVSLL ELENDLRRAV EMIKQNPVNS QFFLSYQPII
CLTTNKITGF ECLVRWAHPT KGLIQPGKFI PLAEETGLII PLGMWILRTA CHQLAVWQKR
LTGRHVCSGL AYSDCNFIAH NFTMSVNISS KNISQPNFLE QVNEILAATN CQPHCLNLEI
TESLIMTNVD LATAVFEKLK NQNIRLSIDD FGTGYSSLSY LHQFPINTIK IDRSFVSQLD
SDTSGQTLKI VSAVIALANN LDLEIIAEGI ETKAQMNQLK QLKCRKGQGY FFSKPLTTSS
VNELLQFTSL TSPFL
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