| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2492 |
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| Symbol | |
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| ID | 4245261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 3837647 |
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| End bp | 3841321 |
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| Gene Length | 3675 bp |
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| Protein Length | 1224 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638107573 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_722172 |
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| Protein GI | 113476111 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.494606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAGTG TTGAAATTCC AAAACCTCAG TTAAAGACTT CATTTCTCCA ACGGCTCCAG
AGTCCAGATC GCCCAGTACT GATCTTTGAT GGTGCGATGG GAACTAACAT CCAATCTCAA
AACTTGACCG CCGAGGATTT TGGTGGAGCG GAATATGAAG GTTGTAATGA ATATTTAGTC
GTCACGAAGC CAGAAGCAGT GGCGAAAGTC CATCGTGATT TTCTGGCAGC AGGGGCAGAT
GTTGTCGAGA CTGATAGCTT TGGATCTAGC CCCTTAGTCC TCGCCGAGTA CAATCTAGCC
GATCGCGCCT ACGAGCTAAG TAGAAAGGCA GCAGAATTGG CGCGTAGTTG TGCGGATGAG
TTTACGAGTC CCGAAAAACC TAGATTCGTC GCAGGTTCCA TCGGTCCAGG AACCAAGCTA
CCCACCCTCG GTCATATTAC CTATGATGAA TTAAAAGCGA GCTTCATGGT GCAAGCAGAA
GGTCTTTATG ACGGGGGAGC CGATCTTTTC ATAGTGGAAA CCTGTCAAGA TGTTCTGCAA
ATTAAGGCAG CATTGAGTGC CTTTGAGGCG GTATTTGCCA AAAAAGGATC CAGACTCCCC
TTAATGGTAT CCGTGACCAT GGAAATTCAG GGAACTATGT TGGTGGGAAC AGATATCTCT
GGGGTGTTAG CAATTCTGGA GCCTTTCCCC ATTGATATTT TGGGTCTAAA TTGTGCGACA
GGTCCAAATT TGATGACCTC TCATATCAAA TATCTATCAG AAAATTCACC ATTCCCCATT
TCTTGTATTC CCAATGCGGG GCTACCAGAA AATATTGGCG GTCAGGCTCA TTATAAAATG
ACCCCGCTAG AATTTAAAAC GTCCATGTCT GAGTTCATTG GTCAGTATGG AGTTCAAATT
GTCGGTGGCT GCTGCGGTAC CCGTCCAGCA CATATTCAAG CATTAGCCGA TGCTGTGGAA
GAAACCCCAC TAAAAGAGCG ATCGGTACGA AAAAATGCTG TGGGTAAGGT TAGAACGCCT
CTCTCCTATA CCCCAGCAGC AGCTTCCATT TATTCTGCCC AAACCTATGA GCAGGATAAT
TCTTTTTTAA TCGTTGGCGA GCGATTAAAT GCCAGTGGTT CTAAGAAAGT CCGCAAGCTT
TTGAATGAAG ATGATTGGGA TGGGTTATTG GCGATCGCTA AATCCCAGGT CAAAGAAGGC
GCCCATATGC TAGATGTAAA CGTGGATTAC GTCGGGCGTG ATGGAGAACG GGATATGCGA
GAACTGGTAT CGCGACTGGT GACTAATACG ACCCTCCCAC TGATGCTTGA CTCCACCGAA
TGGACCAAAA TGGAAGCAGG CCTTAAGGTC GCTGGGGGTA AATGTTTGCT CAATTCCACC
AACTATGAAG ATGGAGAAGA GCGATTTTTT AAAGTGTTGG AATTGGCCAA AGAATATGGT
GCAGGAGTTG TCATCGGCTG TATCGATGAA GAGGGAATGG CTAGAACTGC CAAGAAAAAA
TTTGAGATTG CCCAACGGGC TTATAAGGAT GCCCTCAAGT TTGGAATTCC ACCCCATGAA
ATTTTCTATG ATACCTTAGC TCTACCAATT TCAACTGGAA TTGAGGAGGA TCGGGAAAAT
GCTAAAGCAA CGATCGAATC AATTCGACTG ATTCGGGAAA ATCTGCCCGG TGTCCATTTT
ATGTTAGGGG TCTCTAACAT TTCTTTTGGC TTGAGTCCAG CCACTCGCAT CACCTTAAAT
TCGATCTTCC TCAATGAAGC GATGAAAGCA GGGATGGATG GGGCAATTGT CTCGGCTGCC
AAGATTTTAC CGTTATCAAA GATTGATGAA GAACATCAAC AGATCTGTTG CGATTTGATT
TATGATAATC GCAAATTTGA AGGGGATATT TGCACCTACG ATCCGTTGAC GAAGCTAACG
GAAATTTTTG CGGGAGTGAG TGCAAAAGAT GCTAGATCTG GCCCTTCCTT AGCAGATTTG
CCCATCGACC AACGCTTGAA GCAACATATT ATTGATGGCG AGCGCATTGG ATTGGAAGAT
GCGTTAAAGG TAGCTTTAGA TGCCGGTCAT AAAGCCCTGG AGATTATCAA TACTTTCTTG
CTGGATGGGA TGAAGGTTGT AGGGGAACTG TTTGGCTCTG GTCAAATGCA ATTACCCTTC
GTGTTGCAGT CAGCCGAAAC AATGAAATCT GCGGTAGCTT TCCTTGAACC CTACATGGAA
AAAATAGAAG GAGAGGACGA AGATCGCGGT AAAGGTAAAT TCCTGATTGC TACGGTTAAA
GGCGATGTCC ATGATATCGG GAAAAATCTG GTGGATATCA TATTGACCAA TAATGGCTAT
AAGGTCATCA ATCTGGGCAT TAAACAAGCA ATTGAGGCAA TTGTCGAAGC TTATGAGCAG
CATAAACCTG ATTGTATTGC TATGAGTGGC TTGCTGGTGA AATCTACAGC ATTCATGAAA
GAAAATCTTG CAGCATTTAA TGCTAAAGGT ATTACAGTAC CAGTGATTTT AGGTGGTGCT
GCACTCACAC CAAAATTTGT TTATGGTGAT TGTCAAGATA CTTACCAAGG GCAGGTCATT
TACGGTAAAG ATGCTTTTGC AGATTTGACC TTTATGGATC GGCTGATGCC CGCCAAAGAT
AAGGATTGCT GGGTCGATAC CGAAGGCTTT ACAGGGGAGT TTGCTCAGTT TAACCAAAGG
GGACGCAAAG CAATCAAAGA TTTAGAACGA GAACTCAACG GTGATGGGGA GAAATCCGAT
GGAGAAGTCA ATGGTAATGG AAAGAAACCC AATAAACCCA CTGTAATTGA TACTAAACGT
TCGACAGACG TAGCGATTGA TATCGAACGT CCTGCACCAC CTTTCTGGGG CACGAAAATT
CTTCAGAGTG GTGATCTAAA GCTAGAAGAA CTGTTCTGGT ACATGGATTT ACAGGCACTG
TTCGCTGGTC AATGGCAATT CCGTAAACCG AAAGGCCAAC CTCGTGAGGA ATATGATTGG
TTCCTGGCAT CAAAGGTTTA TCCGATCTTG GAAGAATGGA AGCAAAAAGT TCGCACTGAA
CAATGGTTGG AGCCGACTCT AGTTTATGGT TATTTCCCTT GTGCAGCCAT CGGCAATTCC
GTTCATGTTT ACGATCCGAG TGTTATTGAG CAGGGCTTAA CACCTACAAC AGCAACCCCG
TTTGTCACTT GGACATTCCC CCGTCAGAAA TCCATGCGTC GCCTGTGTAT TGCTGATTTC
ATCCGCCCCC TTGAGCATGA TCAATTTGAT GTTTTGCCTA TGCAGGCAGT AACTATGGGA
GAAATTGCTA CTCAGAAAGC ACAGGAACTT TATCAAGGGA ACGAGTACAC CAATTATCTC
TATTTCCACG GTATGGCGGT GCAGTTGGCG GAAGCCTTAG CAGAATGGAG TCACGCCAGG
ATTCGGCGGG AGTTAGGTTA TGGGGATTTA GAGCCAGATA ACATTCGCGA TATATTAGCT
CAAAGGTATC AGGGTTCTCG GTATAGTTTT GGCTATCCAG CTTGTCCGGT AGTTATCGAT
CAAGTGCCAC AGTTGCAATT ATTGGGAGCT GATCGCATTG GGGTATCAAT TGATGAGAGC
GAACAGCTTT ATCCAGAGCA AACAACTACT GCTTTTGTTA TCTATCATCC TGTTGCTAGA
TATTTTAGTG CTTAG
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| Protein sequence | MLSVEIPKPQ LKTSFLQRLQ SPDRPVLIFD GAMGTNIQSQ NLTAEDFGGA EYEGCNEYLV
VTKPEAVAKV HRDFLAAGAD VVETDSFGSS PLVLAEYNLA DRAYELSRKA AELARSCADE
FTSPEKPRFV AGSIGPGTKL PTLGHITYDE LKASFMVQAE GLYDGGADLF IVETCQDVLQ
IKAALSAFEA VFAKKGSRLP LMVSVTMEIQ GTMLVGTDIS GVLAILEPFP IDILGLNCAT
GPNLMTSHIK YLSENSPFPI SCIPNAGLPE NIGGQAHYKM TPLEFKTSMS EFIGQYGVQI
VGGCCGTRPA HIQALADAVE ETPLKERSVR KNAVGKVRTP LSYTPAAASI YSAQTYEQDN
SFLIVGERLN ASGSKKVRKL LNEDDWDGLL AIAKSQVKEG AHMLDVNVDY VGRDGERDMR
ELVSRLVTNT TLPLMLDSTE WTKMEAGLKV AGGKCLLNST NYEDGEERFF KVLELAKEYG
AGVVIGCIDE EGMARTAKKK FEIAQRAYKD ALKFGIPPHE IFYDTLALPI STGIEEDREN
AKATIESIRL IRENLPGVHF MLGVSNISFG LSPATRITLN SIFLNEAMKA GMDGAIVSAA
KILPLSKIDE EHQQICCDLI YDNRKFEGDI CTYDPLTKLT EIFAGVSAKD ARSGPSLADL
PIDQRLKQHI IDGERIGLED ALKVALDAGH KALEIINTFL LDGMKVVGEL FGSGQMQLPF
VLQSAETMKS AVAFLEPYME KIEGEDEDRG KGKFLIATVK GDVHDIGKNL VDIILTNNGY
KVINLGIKQA IEAIVEAYEQ HKPDCIAMSG LLVKSTAFMK ENLAAFNAKG ITVPVILGGA
ALTPKFVYGD CQDTYQGQVI YGKDAFADLT FMDRLMPAKD KDCWVDTEGF TGEFAQFNQR
GRKAIKDLER ELNGDGEKSD GEVNGNGKKP NKPTVIDTKR STDVAIDIER PAPPFWGTKI
LQSGDLKLEE LFWYMDLQAL FAGQWQFRKP KGQPREEYDW FLASKVYPIL EEWKQKVRTE
QWLEPTLVYG YFPCAAIGNS VHVYDPSVIE QGLTPTTATP FVTWTFPRQK SMRRLCIADF
IRPLEHDQFD VLPMQAVTMG EIATQKAQEL YQGNEYTNYL YFHGMAVQLA EALAEWSHAR
IRRELGYGDL EPDNIRDILA QRYQGSRYSF GYPACPVVID QVPQLQLLGA DRIGVSIDES
EQLYPEQTTT AFVIYHPVAR YFSA
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