| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2481 |
|---|
| Symbol | |
|---|
| ID | 4245250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 3819627 |
|---|
| End bp | 3823592 |
|---|
| Gene Length | 3966 bp |
|---|
| Protein Length | 1321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638107563 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_722162 |
|---|
| Protein GI | 113476101 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.834883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAACA AACGCAAAGA AGCATACATC AACCTCATCG ACCAACTGCT AAATTCCCCT
GGCAGTGAGG TAGAAAAAAT CCTCCAAACG AACCAAGAGT TGGTAGATGA AGGGTTACTC
GAAATAATGG AACTTTGTGC ACAACAACTG GCAGAAAATG ATGACGAAAA TGCTCAAAAC
GCTGCTAATT TTTTACGCCA TCTCAGGAGT CAGCTTGTAG AGTTACTAGA AACTTCAGAA
TTTTCTCCCT CAACTCATTA CTCATCGGCA GAATATTTGA ATTTCTTAGA AGAGGTATTG
GAGGCAACTG CAGAAAGCAA GGGTGACTCG AAAGTTGTCT ACCCACTCCT ACAGCAAAAC
TTAGATAAAC TTGATGATAG CTTTGCTGAT ATATTGCGAA ACTGGGCGAC TGCTAAATTT
TCTGAAGTGG AGGCGGATGT AGCAGAAGAT ATAGCTATAT CTATTGGTAT TTTCAGTAAC
CGCATTCAGC AATTTCCTCT GGGTAACAAA ACAAACAAAA TGGAAATTAG TATTGCAGGT
TATGAAGTAA TGCTAAAAGT CTTTACCTCT GATAGTCAAC GGGAAAATTG GGCACAAACT
CAAAATAATC TCGGCGCTGC CTACATTAAC AGAATAAGGG GAGACAAAGC CGAAAATATT
GAAGCTGCCA TTGCTGCATT ACAACAAGCT TTGCTGGTGT TCACCCAAAC TGACTTCCCG
ATAAACTGGG CAAGAGCTAA AATTAATCTC GGCATTGCCT ACATTTATAG AATAAGGGGA
GACCAAGCTG AAAATATTGA AGCTGCCATT GCTGCATGGC AACAAGCTTT GCTGGTGTAT
ACCCAAACTG ACTTCCCCAT CGACTGGGCA AAAGCTCAAA ATAGTCTCGG CGCTGCCTAC
ACTGAGAGAA TAAGGGGAGA CAAAGCCGAA AATATTGAGG CTGCCATTGC TGCATGGCAA
CAAGCTTTGC TGGTGTATAC CCAAACTGAC TTCCCCATGG AATGGGCAGC AACTGAAAAT
AATCTCGGTG CTGCCTACAT TAACAGAATG AGGGGAGACC AAGCCGAAAA TGTTGAGGCT
GCCATTGCTG CATGGCAACA AGCTTTGCTG GTGTATACCC AAACTGACTT CCCCATCGAC
TGGGCACAAA CTCAATATAA TCTCGGTGCT GCCTACATTA ACAGAATGAG GGGAGACAAG
GCCGAAAATA TTGAAGCTGC CATTGCTGCA TTCCAACAAG CTTTGCTGGT GCACACCCAA
ACTGAATTCC CCATCGACTG GGCACAAACT CAATATAATC TCGGGGCTGC CTACTTTTAC
AGAATAAGGG GAGACAAGGC CGAAAATATT GAAGCTGCCA TTGCTGCATT CCAACAAGCT
TTGCTGGTGC GCACCCAAAC TGACTTCCCT ATCGACTGGG CAATGACTCA AAATAGTCTC
GGTGCTGCCT ACATTAACAT AATGAGGGGA GACAAGGCCG AAAATATTGA AGCTGCCATT
GCTGCATTCC AACAAGCTTT GCTGGTGCGC ACCCAAACTG ACTTCCCTAT CGACTGGGCA
ATGACTCAAA ATAATCTCGG CATTGCCTAC ATTTATAGAA TAAGGGGAGA CCAAGCTGAA
AATATTGAAG CTGCCATTGC TGCATGCCAA CAAGCTTTGC TGGTGTACAC CCAAACTGAA
TTCCCTATCG ACTGGGCAAA AGCTAAAAAT AATCTCGGCC TTGCCTACAT TTATAGAATA
AGGGGAGACA AAGCTGAAAA TATTGAAGCT GCCATTGCTG CATTGCAACA AGCTTTGCTG
GTGTATACCC AAACTGACTT CCCCATCGAC TGGGCCAGAA CTCAAGATAA TCTCGGCCTT
GCCTACATTA ACAGAATGAG GGGAGACAAA GCCGAAAATA TTGAAGCTGC CATTGCTGCA
TGCCAACAAG CTTTGCTGGT GCGCACCCAA GCTGACTTCC CTATCGACTG GGCAAAAACT
CAATATAATC TCGGCCTTGC CTACATTAAC AGAATGAGGG GAGACAAAGC CGAAAATATT
GAAGCTGCCA TTGCTGCATA CGAACAAGCT TTGCTGGTGC GCACCCAAAC TGACTTCCCC
ATCGACTGGG CAATGACTCA AAATAATCTC GGCGTTGCCT ACATTAACAG AATGAGGGGA
GACAAAGCCG AAAATATTGA AGCTGCCATT GCTGCATACG AACAAGCTTT GCTGGTGCGC
ACCCAAACTG ACTTCCCCAT CGACTGGGCA ATGACTCAAA ATAATCTCGG CGTTGCCTAC
ATTAACAGAA TGAGGGGAGA CAAAGCCGAA AATATTGAAG CTGCCATTGC TGCATGCCAA
CAAGCTTTGC TGGTGTATAC CCAAACTGAC TTCCCCATCG ACTGGGCCAG AACTCAAGAT
AATCTCGGCC TTGCCTACAT TAACAGAATG AGGGGAGACA AAGCCGAAAA TATTGAAGCT
GCCATTGCTG CATGCCAACA AGCTTTGCTG GTGTATACCC AAACTGACTT CCCCATCGAC
TGGGCCAGAA CTCAAGATAA TCTCGGGGCT GCCTACTTTT ACAGAATAAG GGGAGACAAA
GCCGAAAATA TTGAAGCTGC CATTGCTGCA TGCCAACAAG CTTTGCTGGT GCACACCCAA
ACTGACTTCC CCATGGAATG GGCAACTATT CAAAATAATC TCGGCCTTGC CTACAGAGAC
AGAATAAGGG GAGACAAAGC CGAAAATATT GAAGCTGCCA TTGCTGCATG GCAACAAACT
TTGCTGGTGT ATACCCAAAC TGACTTCCCC ATCGACTGGG CACAAACTCA ATATAATCTC
GGGGCTGCCT ACTTTTACAG AATAAGGGGA GACAAAGCCG AAAATATTGA AGCTGCCATT
GCTGCATTGC AACAAGCTTT GCTGGTGCGC ACCCAAACTG AATTCCCTAT CGACTGGGCC
AGAACTCAAA ATAATCTCGG TGCTGCCTAC ATTAACAGAA TAAGGGGAGA CAAAGCCGAA
AATATTGAAG CTGCCATTGC TGCATTGCAA CAAGCTTTGC TGGTGTACAC CCAAACTGAA
TTCCCTATCG ACTGGGCCAG AACTCAAGAT AATCTCGGTG CTGCCTACAT TAACAGAATG
AGGGGAGACC AAGCCGAAAA TGTTGAAGCC ACCATTGCTG CATTGCAACA AGCTTTGCTG
GTGTACACCC AAACTGAATT CCCTATCGAC TGGGCACAAA CTCAATATAA TCTCGGGAAT
GTCTACATTA ACAGAATGAG GGGAGACCAA GCTGAAAATA TTGAAGCTGC CATTGCTGCA
TGGCAACAAA CTTTGCTGGT GTTTACCCAA ACTGACTTCC CCATGGAATG GGCACAAACT
CAATATAATC TCGGGAATGT CTACATTAAC AGAATGAGGG GAGACCAAGC CGAAAATGTT
GAAGCCACCA TTGCTGCATG GCAACAAGCT TTGCTGGTGT ACACCCAAAC TGAATTCCCT
ATCGACTGGG CACAAACTCA AAATAATCTC GGTGCTGCCT ACATTAACAG AATGAGGGGA
GACAAAGCCG AAAATATTGA AGCTGCCATT GCTGCATGGC AACAAACTTT GCTGGTGTTT
ACCCAAACTG ACTTCCCCAT GGAATGGGCA CAAACTCAAA ATAATCTCGG TGCTGCCTAC
ATTAACAGAA TAAGGGGAGA CCAAGCCGAA AATATTGAAG CTGCCATTGC TGCATTCCAA
CAAGCTTTGC TGGTGCGCAC CCAAACTGAC TTCCCTATCG ACTGGGCACA AACTCAAAAT
AATCTCGGTG CTGCCTACAT TAACAGAATA AGGGGAGACC AAGCCGAAAA TATTGAAGCT
GCCATTGCTG CATGCCAACA AGCTTTGCTG GTGTATACCC AAACTGACTT CCCTATCGAC
TGGGCAAGAA CTCAAGATAA TCTCGGCATT GCCTACTTTA TACAGAATAA GGGGAGACAA
AACTGA
|
|---|
| Protein sequence | MDNKRKEAYI NLIDQLLNSP GSEVEKILQT NQELVDEGLL EIMELCAQQL AENDDENAQN
AANFLRHLRS QLVELLETSE FSPSTHYSSA EYLNFLEEVL EATAESKGDS KVVYPLLQQN
LDKLDDSFAD ILRNWATAKF SEVEADVAED IAISIGIFSN RIQQFPLGNK TNKMEISIAG
YEVMLKVFTS DSQRENWAQT QNNLGAAYIN RIRGDKAENI EAAIAALQQA LLVFTQTDFP
INWARAKINL GIAYIYRIRG DQAENIEAAI AAWQQALLVY TQTDFPIDWA KAQNSLGAAY
TERIRGDKAE NIEAAIAAWQ QALLVYTQTD FPMEWAATEN NLGAAYINRM RGDQAENVEA
AIAAWQQALL VYTQTDFPID WAQTQYNLGA AYINRMRGDK AENIEAAIAA FQQALLVHTQ
TEFPIDWAQT QYNLGAAYFY RIRGDKAENI EAAIAAFQQA LLVRTQTDFP IDWAMTQNSL
GAAYINIMRG DKAENIEAAI AAFQQALLVR TQTDFPIDWA MTQNNLGIAY IYRIRGDQAE
NIEAAIAACQ QALLVYTQTE FPIDWAKAKN NLGLAYIYRI RGDKAENIEA AIAALQQALL
VYTQTDFPID WARTQDNLGL AYINRMRGDK AENIEAAIAA CQQALLVRTQ ADFPIDWAKT
QYNLGLAYIN RMRGDKAENI EAAIAAYEQA LLVRTQTDFP IDWAMTQNNL GVAYINRMRG
DKAENIEAAI AAYEQALLVR TQTDFPIDWA MTQNNLGVAY INRMRGDKAE NIEAAIAACQ
QALLVYTQTD FPIDWARTQD NLGLAYINRM RGDKAENIEA AIAACQQALL VYTQTDFPID
WARTQDNLGA AYFYRIRGDK AENIEAAIAA CQQALLVHTQ TDFPMEWATI QNNLGLAYRD
RIRGDKAENI EAAIAAWQQT LLVYTQTDFP IDWAQTQYNL GAAYFYRIRG DKAENIEAAI
AALQQALLVR TQTEFPIDWA RTQNNLGAAY INRIRGDKAE NIEAAIAALQ QALLVYTQTE
FPIDWARTQD NLGAAYINRM RGDQAENVEA TIAALQQALL VYTQTEFPID WAQTQYNLGN
VYINRMRGDQ AENIEAAIAA WQQTLLVFTQ TDFPMEWAQT QYNLGNVYIN RMRGDQAENV
EATIAAWQQA LLVYTQTEFP IDWAQTQNNL GAAYINRMRG DKAENIEAAI AAWQQTLLVF
TQTDFPMEWA QTQNNLGAAY INRIRGDQAE NIEAAIAAFQ QALLVRTQTD FPIDWAQTQN
NLGAAYINRI RGDQAENIEA AIAACQQALL VYTQTDFPID WARTQDNLGI AYFIQNKGRQ
N
|
|---|
| |