| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2446 |
|---|
| Symbol | |
|---|
| ID | 4244630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 3769757 |
|---|
| End bp | 3770728 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638107531 |
|---|
| Product | quinolinate synthetase |
|---|
| Protein accession | YP_722131 |
|---|
| Protein GI | 113476070 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0379] Quinolinate synthase |
|---|
| TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.750352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCAA CTCAAACTCG AATCAACCAA AATTTTAATA GCATACCAGA TGATTTGTTT
GAAGCGATCG CCGACCTAAA GAAAGAATTA AATGCTGTTA TTCTAGCTCA CTATTACCAA
GAACCAGATA TTCAAGATAT TGCCGACTAT ATTGGTGACT CTCTTGGCCT TTCTCAAAAA
GCTGCTGAAA CTGATGCAGA TGTAATAGTT TTTGCGGGAG TTCATTTTAT GGCAGAAACT
GCGAAAATTC TTAACCCAAA TAAACTGGTA CTGCTACCAG ATCTAGATGC AGGTTGCTCC
CTCGCCGATA GTTGTCCACC AGAAGAATTT GGCAAATTTA AGGCGGCTCA TCCTGATGCC
ATAGTAGTTT CTTATATTAA TTGTACTGCT GCTATTAAGG CAATGAGTGA TATTATTTGC
ACCAGTTCCA ACTCTGTCAA AATAGTTAAA CAAATACCAA CAGACCAACC GATAATTTTT
GCCCCAGATA AGAACCTCGG TCGCTATGTC ATGGAACAAA CTGGACGAGA TTTGATTTTG
TGGTCAGGCA GTTGTATTGT TCACGAGACA TTCTCTGAGA AAAAGATTGT GCAATTAAAA
ATAGAACATC CTGAAGCTGA GATTATTGCT CATCCAGAAT GTGAACCAAA TTTATTGCGT
CATGCCAATT ATATTGGTTC GACCACTGCT TTATTAAAAT ATTGCCAAGA AAGCCAAGAG
CAAGAATTTA TTGTGGCAAC TGAACCGGGA ATTATTCACC AAATGCAAAA GAGAGAACCC
AAGAAAAACT TTATTCCCGC ACCCGCAATG AATAATTGTG CTTGTAACGA ATGCCCCCAC
ATGAGGCTGA ATAATTTAGA AAAGCTTTAT TTAGCAATGA AAAATAAGAC GCCAGAAATT
ATGATTCCTG AAGAAACACG AGTAGCAGCA TTAAAACCTA TTCAAAAGAT GTTGGAACTT
TCATTCACAT AA
|
|---|
| Protein sequence | MFATQTRINQ NFNSIPDDLF EAIADLKKEL NAVILAHYYQ EPDIQDIADY IGDSLGLSQK
AAETDADVIV FAGVHFMAET AKILNPNKLV LLPDLDAGCS LADSCPPEEF GKFKAAHPDA
IVVSYINCTA AIKAMSDIIC TSSNSVKIVK QIPTDQPIIF APDKNLGRYV MEQTGRDLIL
WSGSCIVHET FSEKKIVQLK IEHPEAEIIA HPECEPNLLR HANYIGSTTA LLKYCQESQE
QEFIVATEPG IIHQMQKREP KKNFIPAPAM NNCACNECPH MRLNNLEKLY LAMKNKTPEI
MIPEETRVAA LKPIQKMLEL SFT
|
|---|
| |