Gene Tery_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2404 
Symbol 
ID4244820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand- 
Start bp3711695 
End bp3712375 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content37% 
IMG OID638107495 
Producthypothetical protein 
Protein accessionYP_722095 
Protein GI113476034 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0266202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.456188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACAAGA AAACTAAAAA CATACTGCTG CTGATACTTT TGTCCATAGC TTCTTACACG 
TTAGTTTGCA TAGTAGGGAA TACTATTTCC CTAAACTCAG CAGCCAAAGC TCCCGTTGAT 
GCTTACTTAG TTTTGGGTGG TAGTATTAAA CGGGAAATTT ATATTACTCA AGTGGCTAAA 
CAATATCCTC ATATACCTAT ACTCATTTCT GCTGGTTCTA AAGACCCCTG TATTGTGAAA 
TTATTTCAAC GGGAAAATGT TCCTTTAGAT GGAGTTTGGT TAGAACATTG CGCTAAATCT 
ACTTTTAGTA ATTTCTTTTT TACTATGCCA ATTTTAGAAG AATGGGGAGT ACAACATATT 
AAACTGGTGA CATCTCCTAG TCATTTGCCC AGGGCAAAGT GGTTGGCACA AATTATTTTG 
GGTACTCATG GAATTTGGGT AGAAACTGAT ATTGTTCAGG AAATAGGTAT ACCAGGAAAT 
CAAGAATCTC CTCTCAAGAC AGCAGTAGAT GTAATTCGTA GTTTAATGTG GGCGTTAGCA 
AGTAAGGTAA TAGAAGCAAA ATGTACAGAT GTGGTCAAAC TCTCACAGGT AAATATGACA 
CAATGGTGTC AGAAAGGTTT TCAGTGTGAA CATCAAGCAC AATTGAAACC AGAATCAATT 
TGTTATCCTA AGCCGAGGTA G
 
Protein sequence
MHKKTKNILL LILLSIASYT LVCIVGNTIS LNSAAKAPVD AYLVLGGSIK REIYITQVAK 
QYPHIPILIS AGSKDPCIVK LFQRENVPLD GVWLEHCAKS TFSNFFFTMP ILEEWGVQHI 
KLVTSPSHLP RAKWLAQIIL GTHGIWVETD IVQEIGIPGN QESPLKTAVD VIRSLMWALA 
SKVIEAKCTD VVKLSQVNMT QWCQKGFQCE HQAQLKPESI CYPKPR