| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2378 |
|---|
| Symbol | |
|---|
| ID | 4245026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 3672572 |
|---|
| End bp | 3675706 |
|---|
| Gene Length | 3135 bp |
|---|
| Protein Length | 1044 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638107471 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_722071 |
|---|
| Protein GI | 113476010 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.856569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTTC ATCTATCAGC TTGGTCTATC AAAAAACCAG TTCCTACTTT GGTCATGTTT
TTGGTTTTAA CAGTAGTAGG GCTAATGTCA TTTTTTCAAT TAGGAATAGA CAACTTACCC
AATATTGATA TTCCCCTAGT ATCAGTAACA GTAACTCAAC AAGGAGCAGG TCCGACAGAA
TTAGAAACAC AAGTCACAAA AAAAGTTGAA GATGCTGTGG CAGGTTTAGG AGATATTGAG
CAACTAAAAT CAACCGTAAC CGATGGACTA TCTACAACTG TTATTAGTTT TGACTTAGGA
GTAGATAGTG ATCGCGCTAC TAACGATGTT CGCAATGCCA TAGATAAAAT TCGCCAAGAT
TTACCCCCAG ATGTTAATGA CCCCATTATT ACAAGAATAG AAATAGGTGG AGACGGACCA
ATAATGACTT ATGCTGTCGC TTCTGACAAA CGGTCTGTAG AAGAGTTAAG CGAATTGGTT
GACAAAGAAA TTAGTCGAGC TATTCTCAAT GTTCCTGGTG TTTCTCAAAT TAACCGTATT
GGGGGAGCTG ACCGCGAAAT ACTCATAGAA CTAAGTCCCC AAAGACTAGA AAGTCTGGGT
ATTACTGCTA CTCAAGTTAA CGATCAAATT CGTGCTTTGA ATGCTAACAT ACCAGGAGGA
CGTTCTCAAA CAGGAGGTAC AGAAAAAAAT ATTCGGACTT TAGGGAGTGC TGAGACAGTA
GAGGCATTGA AAGAATATCA AATTATTCTG CCTTCGGGTG GTGCCGTTCC CCTTTCCAGT
GTAGGAAAAG TCATTGATGG TTTTGAGGAA ACTAGACAAA CAGCTTGGTT ATTAGAAAAA
AATAGTGAGG GTAAAGCTTT AGGTTCTGAA CAAAACTTAG TCAGAAATAA TATTGGTAAA
CCAGTTGTAG CTTTCGGGGT AGTTCGCAGT ACAGGCAGTA CCTTAGTTAC TGTAGAAAAA
AATGTACGGA AAACAGTTGC CAAACTTGAA AAAACATTGC CAGAAGATGT AGATTTACAA
CTCATTTTTA CTCTGGCAAC AGATATTGAA CAATCATATC AAGCATCAAT AGACGCTTTA
GTTATTGGTT CCATACTCAC TGTCATAATT GTTGGTATAT TTTTACGAGA CTGGCGACCA
ACTATAGTGA CAGCAGTAGC ATTACCATTA TCAATACTCC CTACTTTTTT GGTAATGAGA
GCTCTCAATT ACACTCTAGA TGGGATGACT CTATTAGCAC TAGCATTGGC AATGGGTAAC
TTAGTAGATG ATGCTATTTG TATGATCGAG AATATCGAAC AACATATTAA CAAGGGAAAA
AATCCGTTCC AAGCAGCTTT GGATGGGTCA GCAGAAATTG GTTTGGCAGT AGTTGCAACA
ACTGCTACAA TAGTTGCAGT CTTTTTACCT GTAGCGTTTA TGGGTGGGAT ACCAGGTAAG
TTTTTCAAAC CATTCGGCAT TACTGTAGCA GTTGCCACCA TGTTTTCTAC ATTAGTTGCG
ACTACAATGA CACCAATGTT GGGTGCGCGG TTATTGAAAC ATAGACGGCT AAAAACATCT
CCTGGTTTTC CAGAACACAA TTACAAACAA AGAAAATTTC GCCCTTACAG TCAGTTACTA
AATTGGGCAT TACGCCATAA AATTATCACC TTAGCTATTG CAGTTATCTT TTTTATTAGT
AGTTTGCAAC TGATTCCACT ACTTCCGAAA GGATTAACTG GTGCTGAGGA TCGGGGAGTG
AGTATAGTTT CCCTAGAATT GTCTCCTGGT TCAACTTTAG CAGAAACAGA ACAAGCCACA
CAACAAATAA TGCAACTGTT ACAAGAAAAT CAAGTTGTCA CTAGCGTATT TGCTAATGTG
GGTAGCGAAT TTGTGAACAA AAGTAGATTA TACGTTACGA TCTTACCCAG AAAAGAAAGA
AATTTTTCTC AAAAAGAATT TGAAAAACAG GCACGACCAT TATTTCAGAA TATTCCAGGA
GCACGAATTA ATTTTGTTAG TATGGGTGCT GGGGGTACGG GTAAGGATTT AACCATTGTT
CTGAACAGCG ACAATGCAGT TACTTTACAA CAGACATCTG ATGCTTTAGA ACGACAAATG
CGAGAGGTTC CGGGGTTGGT GGATGTGACT TCTAGTGCTA GTTTAGTGAA ACCAGAAATT
TTGATCCAAC CATTACCTGC CAGAGCAGGA GATTTAGGAG TTTCAGTACA GGCGATCGCT
CGTACCGCAT CATTAGCTAC TATCGGAGAT AATGAGAAAA ATTTAGCTAA GTTTGATCTG
GCAGATCGTC AAATTCCAAT TCGGGTACAA TTGGCAGAGG AATTTAGAAA TGACTTAGAT
GTAATTAAAA ATTTACGCAT TCCCAGTAAA AATGGTAGGT TGGTACCATT ATCTGCAGTA
GCTGAGATTA GTGTCGGTAG TGGACCTGCG CAAATAAAAC GTTTTAACCG TTATCGTCAA
GTTTCCTTTG GGGCAAATTT ACAGGGTATT TCTCTGGGAG ATGCACTAAC AGAGGTTAAA
TCATTACCAG CAATAAATCC ACTACCTCTT GATATCAGTG AACAATCTGA TGGTAGTGCA
AAACTTATGA TGGATGTGTT TAATGGTTTT GCAAGTGCTT TAGGTTTATC AGTATTGTGT
ATTTATGCAA TTTTAGTGTT ACTATACAAT AACTTTCTTT ATCCTATAGT AATTTTGGTA
GCATTACCTT TATCAATTGG TGGTGCATTG TTAGGGTTGC TAATTTTCCA GAAAGAGTTA
GGTTTGTTTG CTTTAATTGG AATTGTACTG TTGATGGGTT TGGTGACAAA AAATGCGATT
TTGTTAGTAG ACTGTTCCTT AGCCAATGAA GAAAAAGGAA TGGCTCGGTT CCATGCAGTC
CGAGAAGCTG GTATTTCTCG CTTGCGGCCA ATTTTAATGA CTACATTTTC AACCATGGCC
GGAATGTTAC CTATTGCCCT AGAATTAGGA GCAGGAGGTC CAGTCAGAAG TCCCATGGCG
ATCGCTGTCA TTGGTGGTTT AACTGTGTCA ACGTTATTAA CGTTAGTAGT AGTGCCTGTG
TTATTTAGTT ACGTTGACTT GGTTGCAAAA AATTATGAAA ACCACATTAA GGTACAAAGC
TACTCGAGCA AGTAA
|
|---|
| Protein sequence | MSFHLSAWSI KKPVPTLVMF LVLTVVGLMS FFQLGIDNLP NIDIPLVSVT VTQQGAGPTE
LETQVTKKVE DAVAGLGDIE QLKSTVTDGL STTVISFDLG VDSDRATNDV RNAIDKIRQD
LPPDVNDPII TRIEIGGDGP IMTYAVASDK RSVEELSELV DKEISRAILN VPGVSQINRI
GGADREILIE LSPQRLESLG ITATQVNDQI RALNANIPGG RSQTGGTEKN IRTLGSAETV
EALKEYQIIL PSGGAVPLSS VGKVIDGFEE TRQTAWLLEK NSEGKALGSE QNLVRNNIGK
PVVAFGVVRS TGSTLVTVEK NVRKTVAKLE KTLPEDVDLQ LIFTLATDIE QSYQASIDAL
VIGSILTVII VGIFLRDWRP TIVTAVALPL SILPTFLVMR ALNYTLDGMT LLALALAMGN
LVDDAICMIE NIEQHINKGK NPFQAALDGS AEIGLAVVAT TATIVAVFLP VAFMGGIPGK
FFKPFGITVA VATMFSTLVA TTMTPMLGAR LLKHRRLKTS PGFPEHNYKQ RKFRPYSQLL
NWALRHKIIT LAIAVIFFIS SLQLIPLLPK GLTGAEDRGV SIVSLELSPG STLAETEQAT
QQIMQLLQEN QVVTSVFANV GSEFVNKSRL YVTILPRKER NFSQKEFEKQ ARPLFQNIPG
ARINFVSMGA GGTGKDLTIV LNSDNAVTLQ QTSDALERQM REVPGLVDVT SSASLVKPEI
LIQPLPARAG DLGVSVQAIA RTASLATIGD NEKNLAKFDL ADRQIPIRVQ LAEEFRNDLD
VIKNLRIPSK NGRLVPLSAV AEISVGSGPA QIKRFNRYRQ VSFGANLQGI SLGDALTEVK
SLPAINPLPL DISEQSDGSA KLMMDVFNGF ASALGLSVLC IYAILVLLYN NFLYPIVILV
ALPLSIGGAL LGLLIFQKEL GLFALIGIVL LMGLVTKNAI LLVDCSLANE EKGMARFHAV
REAGISRLRP ILMTTFSTMA GMLPIALELG AGGPVRSPMA IAVIGGLTVS TLLTLVVVPV
LFSYVDLVAK NYENHIKVQS YSSK
|
|---|
| |