| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2349 |
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| Symbol | |
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| ID | 4245231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 3628413 |
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| End bp | 3630362 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638107442 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_722042 |
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| Protein GI | 113475981 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0186841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATA TTACTAAACT AACTGTTGGG TTAATTACTA TTGCTCTGGT CAGCTGCAAT
AAATATGAAT CACAAATAAG TACAGATGTT TCTACTAAAA TTTCTAGACC TGATCCAATT
ATTACTCCTA GACAAGACAA TGCTCCTTTC AACCAAATTT ATATATATAG ATTAGCTGAA
AATATTACTG TAGAAGTTGT TGCTCGTAGT ACTGTTTCTG GAGGTGACCC TTTTAGCTCG
TCAGGTTCGG GGGTTATTAT TGGTAAACAA GGTTCTACTT ATTATGTGCT CACTGCCAAG
CATATTTTTC AGTACCAAGA TGACTATCGG GTAGTTGTTC GCAGTAAAAA ACCGGGGGAG
GATGCGGAAA TTCTGAAGCT AGAAATTATC TACCGTTATC CAGATGCAGA TTTGGCTGTG
TTTAAGTTTG CTAGTGTGAA GCAATATAAG GTGGCTGAAG TAGGGGAAGC GAGTCAGTTA
AGGAAAAATA GTGAAGTTTA TGTGGGGGGT TGGCCTGGGG CTGAGAATAG GGAAGGTTTT
CAGTTCACTC CGGCGAAGGT GACTAACCCA CGGGCAGGAG ATCTTTTAAA TTATGAGCCT
ACTGTACCTG GTGAGGGTGT ATATCCTGGT ATGAGTGGGG GGGCGGTTTT GAATAAGGCG
GGGCAGTTGA TGGGTATTCA TGTGGGGTTG ACAAAGGCTG GAGATGGGGA GGGGGTTTTG
GTTTCGACTT TTTTGCGGGA TATACCACAG CAGGTGAGCA GGGTTTTGGT GAGGTCAACT
TCTGCTGCTT TGCCTTCTCC GATACCTTCC CCTAAAAATC GGGCTGTTGG AAATACTGAT
AATGTTACTC CATCTCAAAT TCAGAATGCC GAAAGTTACT ATGAACAAGG AGATAAACAC
CATGATAGGG AAGAATTTGA ACAGGCGCTC GCTGACTATA ACCAAGCCAT TCAACTTAAT
CCCAAATATG CTGATGCTTA CAACAACAGG GGTATTGTTT ACCGTAAGCA GGGAAAATAT
GATTTGGCGC TCGCTGACTT AAACCAAGCC ATTCAACTTA ATCCCAAATA TGCTGATGCT
TACAAAAACA GGGGTAATGT TTACTATAAC CAGGGAAAAT ATGATTTGGC GCTCGCTGAC
TATAACCAAG CCATTCAACT TAATCCCAAA TATGCTGAAG CTTACAACAA CAGGGGTTTG
GTTTACGATG ACCAAGGAAA ATATGATTTG GCGATCGCTG AGTTTAACCA AGCCATTCAA
CTTAATCCCA AATATGCTTA TGCTTACAAC AACAGGGGTG TGGTTTACGA TGACCAGGGA
AAATATGATT TGGCGCTCGC TGACTATAAC CAAGCCATTC AACTTAATCC CAAATATGCT
GAGGCTTACA ACAACAGGGG TGGTGTTTAC CTTGAGCAGG GAAAATATGA TTTGGCGATC
GCTGACTATA ACCAAGCCAT TCAACTTAAT CCCAAATTGG CTGAAGCTTA CAACAACAGG
GGTGCGGTTT ACCGTAAGCA GGGAAAATAT GATTTGGCGC TCGCTGACTA TAACGAATCC
ATCAGACTAA ATAACCCTCA GCTTTGGCTG CCTTACAACA ACAGGGGTTT GGTTTACAAT
GACCAGAGAA AATATGATTT GGCGCTCGCT GACTATAGCC AAGCCATTCA ACTTAATCCC
AAAGATGCTT ATGCTTACTA CAACAGGGGT AATGTTTACG ATGACCAGGG AAAATATGAC
TTGGCGATCG CTGACTATAG CCAAGCCATT CAACTTAATC CCAAATATGC TAATGCTTAC
TACACCAGGG GTCTGACTAA CAAGGATCAA AGAAATATGG AAAAAGCTAT ATCAGACTTT
GAAAAAGCTG CCGACTTATA CAAACAACAA GGAAATCAAA CATGGTATCA AAACTCTCTA
GATCAACTCA AAGAATTACG AGGATCTTAA
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| Protein sequence | MKHITKLTVG LITIALVSCN KYESQISTDV STKISRPDPI ITPRQDNAPF NQIYIYRLAE
NITVEVVARS TVSGGDPFSS SGSGVIIGKQ GSTYYVLTAK HIFQYQDDYR VVVRSKKPGE
DAEILKLEII YRYPDADLAV FKFASVKQYK VAEVGEASQL RKNSEVYVGG WPGAENREGF
QFTPAKVTNP RAGDLLNYEP TVPGEGVYPG MSGGAVLNKA GQLMGIHVGL TKAGDGEGVL
VSTFLRDIPQ QVSRVLVRST SAALPSPIPS PKNRAVGNTD NVTPSQIQNA ESYYEQGDKH
HDREEFEQAL ADYNQAIQLN PKYADAYNNR GIVYRKQGKY DLALADLNQA IQLNPKYADA
YKNRGNVYYN QGKYDLALAD YNQAIQLNPK YAEAYNNRGL VYDDQGKYDL AIAEFNQAIQ
LNPKYAYAYN NRGVVYDDQG KYDLALADYN QAIQLNPKYA EAYNNRGGVY LEQGKYDLAI
ADYNQAIQLN PKLAEAYNNR GAVYRKQGKY DLALADYNES IRLNNPQLWL PYNNRGLVYN
DQRKYDLALA DYSQAIQLNP KDAYAYYNRG NVYDDQGKYD LAIADYSQAI QLNPKYANAY
YTRGLTNKDQ RNMEKAISDF EKAADLYKQQ GNQTWYQNSL DQLKELRGS
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