Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2319 |
Symbol | truB |
ID | 4245201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3592521 |
End bp | 3593426 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638107415 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_722015 |
Protein GI | 113475954 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.163994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00744574 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAGGAT TTCTCAATCT TAACAAACCA TCGGGCATGA CTTCCCATGA CTGTGTAGCA AAAGTACGAA AGCTACTACG TCTCAAGCGT GTTGGACATG GAGGAACTCT TGACCCTGCT GCTACTGGTG TTTTACCTAT TGCAGTGGGA AAAGCAACCA GGTTATTACA GTTTCTACCT TCAGAAAAAG CTTATTTTGG TACAGTTAAA TTTGGTATAA TTACTACTAC TGATGACTTA GAGGGAGAAA TTGTTCAATC TGCACCAGTA CCAGAATTAA TGTTGTCTGA TATTGAAAAA GTATTACCAA ATTTCCTAGG TAAAATAGAG CAAGTGCCAC CTAGTTATAG TGCAATACAG GTAGAAGGAA AGCGACTTTA TGATTTAGCG CGTCAGGGAA AAACAGTTGA GGTTCCTACC CGTATTGTTG AAGTGTTTAA TATAAAAATT CTTGACTGGC GAAGTGGAGA TTTTCCAGAA GTAGACTTGG CGATCGCTTG TGGTACAGGA ACTTATATTC GAGCGATCGC TCGCGATCTA GGTAGAACTT TAAGTATTGG CGGAACTTTA GCTGCTTTAA CCAGAATAGA AAGTAGTGGT TTTTCTGAGG AAAATAGTCT CACTTTTGCA GAAGTGGAAA ATCAACTACA GGAAAATAAG TTTAGTCTTT TATCTATAGA AATAGCATTG GCACATTTAC CAGTGATAGT CTTAATTACT GAAGATGCAA AAAGATGGTG TCAAGGTCAA CGTTTACCCT ATCAAGTAAA ATGGCAGATA GAAACTAAAA AAGCTGAGCA CTATTTCCGA GTATACAATT ATAAAGGTGA CTTTCTAGGT ATTGGGCAGT TAATCAAATC TGAAGAAAAT TTATTATTAG CACCTCAAGT TGTAATTAGT AATTAG
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Protein sequence | MQGFLNLNKP SGMTSHDCVA KVRKLLRLKR VGHGGTLDPA ATGVLPIAVG KATRLLQFLP SEKAYFGTVK FGIITTTDDL EGEIVQSAPV PELMLSDIEK VLPNFLGKIE QVPPSYSAIQ VEGKRLYDLA RQGKTVEVPT RIVEVFNIKI LDWRSGDFPE VDLAIACGTG TYIRAIARDL GRTLSIGGTL AALTRIESSG FSEENSLTFA EVENQLQENK FSLLSIEIAL AHLPVIVLIT EDAKRWCQGQ RLPYQVKWQI ETKKAEHYFR VYNYKGDFLG IGQLIKSEEN LLLAPQVVIS N
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