Gene Tery_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2307 
Symbol 
ID4243302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3576309 
End bp3576746 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content35% 
IMG OID638107404 
Producthemolysin-type calcium-binding region 
Protein accessionYP_722004 
Protein GI113475943 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2931] RTX toxins and related Ca2+-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.138932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAATAT CTAAAATTAT TGAACTATGC CAATATCTAA AATTATTGAA CTATAGACTA 
ATTGGAAGTA GTGGAAACGA CATATTAGTT GGTGGTAAAG GCAAAGATAT TCTCACAGGT
GGCAGTGGAG TCGATCGCTT CTTCTTTGAA TCTCCCAAAG ACGGCATAGA CAAAATTACA
GATTTTAACG CTTTAAACGA AACTATAGTC ATTAACAGTC GCACATTCGA CAGCTTGAAC
CCCGGTAAAT TATTAAGTAA CCAATTTTCT ATTGGATCAA GAGATGCAAA AGCTACCACA
TCAGACCAAA GATTTATTTA CACCACTGAT GGGTCATTAT TCTTCGATCC AGACGGAAAA
GGTGGCATTG AACAAACTAA AATAACTGTT TTTGCTAATC TTCCTTTTCT ATCCAGCGAT
AACTTTGAAA TTGTTTAA
 
Protein sequence
MPISKIIELC QYLKLLNYRL IGSSGNDILV GGKGKDILTG GSGVDRFFFE SPKDGIDKIT 
DFNALNETIV INSRTFDSLN PGKLLSNQFS IGSRDAKATT SDQRFIYTTD GSLFFDPDGK
GGIEQTKITV FANLPFLSSD NFEIV