Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2307 |
Symbol | |
ID | 4243302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3576309 |
End bp | 3576746 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638107404 |
Product | hemolysin-type calcium-binding region |
Protein accession | YP_722004 |
Protein GI | 113475943 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.138932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCAATAT CTAAAATTAT TGAACTATGC CAATATCTAA AATTATTGAA CTATAGACTA ATTGGAAGTA GTGGAAACGA CATATTAGTT GGTGGTAAAG GCAAAGATAT TCTCACAGGT GGCAGTGGAG TCGATCGCTT CTTCTTTGAA TCTCCCAAAG ACGGCATAGA CAAAATTACA GATTTTAACG CTTTAAACGA AACTATAGTC ATTAACAGTC GCACATTCGA CAGCTTGAAC CCCGGTAAAT TATTAAGTAA CCAATTTTCT ATTGGATCAA GAGATGCAAA AGCTACCACA TCAGACCAAA GATTTATTTA CACCACTGAT GGGTCATTAT TCTTCGATCC AGACGGAAAA GGTGGCATTG AACAAACTAA AATAACTGTT TTTGCTAATC TTCCTTTTCT ATCCAGCGAT AACTTTGAAA TTGTTTAA
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Protein sequence | MPISKIIELC QYLKLLNYRL IGSSGNDILV GGKGKDILTG GSGVDRFFFE SPKDGIDKIT DFNALNETIV INSRTFDSLN PGKLLSNQFS IGSRDAKATT SDQRFIYTTD GSLFFDPDGK GGIEQTKITV FANLPFLSSD NFEIV
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