Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2297 |
Symbol | |
ID | 4243292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3566510 |
End bp | 3567196 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638107394 |
Product | AAA ATPase, central region |
Protein accession | YP_721994 |
Protein GI | 113475933 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.754524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTACAG GATGGGAAAG ACAAAAAAGT ACAAATACAA AAACAGAGGA AATAAAAACT ACAAATATTA ACAAACCTCC TCAACAAACT CCCACCAATA ATTCCTCTGA TAAAACAACT GAAATAAACA GAATGGAAAT GTTTATCCCA GAAGAACCTC AGAGAAGTTT AGACGATCTA ATAGTTCCCT CAACCGTCAA AAATAGAATT GATACAGCAC TGAATAGAAT TAAATATCAC GATATTTTAT ATTACCAATG GAACTTAAAA AGTATTGACC CCAGAGGTAA ACGTACCGCA ATTAATTTAT TTGGGTTACC AGGTACAGGT AAAACTTTTT GTGCAGAAGC GATCGCTCAC ATTTTAAAGA AAAAAATCAT CAAAGTTAAC TACGCAGAAA TTGAGTCTAA ATATGTAGGT GAAACCCCAA AAAACATTAC CGCAGCTTTT AAAAAAGCCC AAGAAACTGA CTCAGTTTTA TTCTTTGATG AAGCTGACTC TATCTTAGGA AAAAGATTAA CTAATGTCAC CCAAAGTTCC GATCATGGAG TTAATGTTAG TCGTTCCGTA ATGTTACTTC AACTAGACAA ATTTGATGGA GTCGTAATTT TTGCCACGAA CCTCGCCAAA AACTATGATG GAGCATTTGT CCGTCGCATT TTAGCACACA TTGAATTTGA ATTATAG
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Protein sequence | MPTGWERQKS TNTKTEEIKT TNINKPPQQT PTNNSSDKTT EINRMEMFIP EEPQRSLDDL IVPSTVKNRI DTALNRIKYH DILYYQWNLK SIDPRGKRTA INLFGLPGTG KTFCAEAIAH ILKKKIIKVN YAEIESKYVG ETPKNITAAF KKAQETDSVL FFDEADSILG KRLTNVTQSS DHGVNVSRSV MLLQLDKFDG VVIFATNLAK NYDGAFVRRI LAHIEFEL
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