Gene Tery_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2287 
Symbol 
ID4243282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3557173 
End bp3557646 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content31% 
IMG OID638107385 
ProductTspO and MBR like proteins 
Protein accessionYP_721985 
Protein GI113475924 
COG category[T] Signal transduction mechanisms 
COG ID[COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.295207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAT CTTGGGTAAT AATTGGCAGT GTTACTTTCT TAATACCATT TAGTAGTAAT 
TTCTTTATTC GTTCTAGTGA TGTTCAATGG TTTAGACGTT TACAAAGACC AAGTTGGTTA
ACTTTTGAAA GATTAATACC CTTAATTTGG ACGACGATTT TTATTTGTGG CGGTTGGTCT
GCATATATTA TTTGGGAACA AGAACCAGGA ACTCAAAAAA CTTGGTTATT GATGGCACTA
TATTTATTAT TAGAAATAGT GACAATAGCT TACACACCTG TTATGTTTAG GACACAAAAT
TTGCAGGTAG GAACAATTAT TGGGGGAACT GGTTTTGTAT TAAGTATAAT CCTAATTTTG
AGTATCTGGC AAATTAATAG TTGGGCAATA ATTTTATTAT TACCCTATAT ATTTTGGAGT
CCTATTGGTA CTTATACTAC TTGGGAAATG AGTAATATTA ATTCTGAGAG TTAG
 
Protein sequence
MIKSWVIIGS VTFLIPFSSN FFIRSSDVQW FRRLQRPSWL TFERLIPLIW TTIFICGGWS 
AYIIWEQEPG TQKTWLLMAL YLLLEIVTIA YTPVMFRTQN LQVGTIIGGT GFVLSIILIL
SIWQINSWAI ILLLPYIFWS PIGTYTTWEM SNINSES