| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2279 |
|---|
| Symbol | |
|---|
| ID | 4243274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 3546569 |
|---|
| End bp | 3547588 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638107378 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_721978 |
|---|
| Protein GI | 113475917 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5322] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.898255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGTC TAATTGGTCA TCTAACTAAC TTAGAACACG CCCAATCTGT AGCAAGAGAT
TTAGGATATC CAGAATATGC AGATCAAGGT CTTGACTTCT GGTGTAGTGC TCCTCCTCAA
ATAGTCGATA CAATCAAAGT AACAAGTATT ACGGGTCAGA AAATTGAAGG CAAGTATGTA
GAATCTTGTT TTCTCCCAGA AATGCTAGCC TCTAGCAGAA TTAAAGCAGC TACTCGTAAG
ATAATGAATG CTATGGCCCA TGCTCAGAAG CATGGTATTG ATATAACTGC TTTGGGTGGG
TTTTCATCAA TTGTTTTTGA GAATTTTAAT TTGCAGAAGT TTAAGCAAAT TCGGAACATT
ACATTGGAAT TTAAACGTTT TACTACTGGC AATACTCACA CTGCTTATAT TGTCTGTCAG
CAAGTGGAAC AAGGGGCACA AAAGTTAGGA ATTGATTTAT CAAAAGCAAC AGTGGCAGTA
TGTGGAGCAA CTGGTGATAT TGGTAGCGCA GTATGTCGCT GGTTGAATAC TAAGACAGAA
GTAGAAGAGT TGTTGTTGAT AGCTCGTAAA CAAGAGAGGC TTAATGCTCT GCAAAAGGAA
TTAAAGCGAG GCAAAATATT AGAATTAAAT TCAGCTTTAC CTATGGCTGA TATTATAGTT
TGGGTAGCTA GTATACCGGA AGCTTTAGAA ATTAACCCGA ATGTTTTAAA GAAACCCTGT
TTATTGATTG ATGGGGGTTA TCCTAAAAAC ATGGCTACTA AGGTTCAGCA AGAAGGAATC
TATGTTCTCA ATGGTGGAAT TGTAGAACAT TCTCTTGATA TTGACTGGAA AATTATGAAA
ATTGTCAATA TGGAAGTACC AGGTCGTCAG TTATTTGCTT GTTTTGCAGA GTCAATGCTA
CTGGAATTTG AAAAGCTATA TACTAATTTT TCTTGGGGAC GGAATTTAAT TACTGTAGAA
AAAATGGAAT TGATTGGAAA GTTATCTGTT AAGCATGGAT TTAAACCTTT AATGCTTTGA
|
|---|
| Protein sequence | MFGLIGHLTN LEHAQSVARD LGYPEYADQG LDFWCSAPPQ IVDTIKVTSI TGQKIEGKYV
ESCFLPEMLA SSRIKAATRK IMNAMAHAQK HGIDITALGG FSSIVFENFN LQKFKQIRNI
TLEFKRFTTG NTHTAYIVCQ QVEQGAQKLG IDLSKATVAV CGATGDIGSA VCRWLNTKTE
VEELLLIARK QERLNALQKE LKRGKILELN SALPMADIIV WVASIPEALE INPNVLKKPC
LLIDGGYPKN MATKVQQEGI YVLNGGIVEH SLDIDWKIMK IVNMEVPGRQ LFACFAESML
LEFEKLYTNF SWGRNLITVE KMELIGKLSV KHGFKPLML
|
|---|
| |