Gene Tery_2266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2266 
Symbol 
ID4243359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3524520 
End bp3528161 
Gene Length3642 bp 
Protein Length1213 aa 
Translation table11 
GC content38% 
IMG OID638107367 
Producttetratricopeptide TPR_2 
Protein accessionYP_721967 
Protein GI113475906 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4421] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAA ATAATTCCCT TAAAATCGCT AACAAATTAT TGCAGGCGGG TAAATTAGAA 
GATGCCCAAA AAGAGTATCA AAAACTCATC GAATTACAGC CCAATTTTGC TTGGAATTAC
TATTACTTGG GGCAGTTGTT TTTTCAACAA GGAAAATGGC AGGATGCAGT TACCCAATAT
AGAAAAGCCA TTAAACTCAA TCCTAATTCT GCTACCTTGC ACAATAGTTT AGCGGAGGCT
TTAATAGAGC AAGGGAAATT AGATGAGGCT ATTAACTATT CGCAAAAAGC TATTTTTCTA
GAGCCAGACT TGGCTATTTA TAATCAAACT TTAGCCTTAG CTTATGAGGC TAAATTAGAT
TTATGGCAGG CATTCAAGAC TTGGCAAAAA ATCCTTTCTC TTCATCCAAA TCACTCTCTG
GCAACTCAAA AAATCTCTCG CTTGGAAACA GATATTGCTC TCAATTGTAT CGATAACGGG
AATAAATTAA ACGAGGCAGG AAAGATCAAG GAAGCTGTTG AATTTTATCA ACAAGCATTA
ATTCTGAATC CTCAACAACC GATGTCTATT TATCGTAGTT GTGGTAATAA TTTAATGACT
TTAGGCAAAT TTGAGTCAGC AGAAAGGGTT TTTCAACAAT TAATAAAATT TTATCCAGAA
CTACCAGATG GTTATGATGG TTATGCCAGG GTAACTCAGA GTTTAGGGGA TTGGGAACTA
GCATTAAAAC GGTGGTCGGA GGCGATTTTT AAATTCCCCG AAAATATCGG TTTTCAAGTT
CAAAAAGGTA ATACTTTAAT CAATTTAGCC AGATTTGATG AAGCAAAAGC GGTATTTCAA
CATTTAAAAG AAAAGTATCC AAATCAACCT CAAGGTTATG AGAATTATGC GAGATTAATT
CATAGGTTAG GTGATGGGGA GTTGGCATTA AAATTGTGGT CAGAGGCGAT TATTAAATTT
CCTAAACCTA TCGTTTTTCA AGTTCAAAAA GGCAATGCCT TAATCAATTT ATCTCGTTTT
GATGAGGCAG AAGCGGTTTT TCAACAATTA AAAGAAAAGT ATCCAAATAG ACCTCATGGT
TACGAACGTT ATGCAGCTTT AACTCAGAGT TTAGGGGATT GGGAATTGGC ATTAAAACGG
TGGTCGGAGG CGGTATTCAA ATTTCCCGAA AATATTGATT TTCAAGTTCA AAAAGGCAAT
GCCTTAATCA ATTTATCTCG TTTTGATGAG GCAGAAGCGG TTTTTCAACA ATTAAAAGAA
AAGTATCCAA ATAGACCTCA TGGTTACGAA CGTTATGCAG CTTTAACTCA GAGTTTAGGG
GATTGGGAAT TGGCATTAAA ACGGTGGTCG GAGGCGGTAT TCAAATTTCC CGAAAATATT
GATTTTCAAG TTCAAAAAGC CAATGCTTTA ATCAATTTAT CTCGTTTTGA TGAGGCAGAA
GCGGTTTTTC AACAGTTAAT AGAAAAGTAT CCAAATCAGC CTGATGGTTA TGAACGTTGT
GCAGCTTTAA CTCAGAGTTT AGGGGATTGG GAGTTGGCTT TGGAGCGTTG GGAAAATGCT
ATTGCTAAGT TTCCCGGCCA TTTTAATTTT TATTTGCAAA AAGGGGATGT ACTGGCTAAT
TTGTTTAGGT ATGAGGAAGC AGAAATTTGG TGGGAAAAAG TTATTGCTTT ATATCCCGCT
CGCCATGAAG GATTATACAA AAGTGCTGCT TTGGCGAGGC TGTTGGGAAA TCGGGAGTTT
GCCTGGCAAA GGTTTGAACA AGCGATCGAA AAGTTCCCTG GGCATATTCC GGCATACTGT
GAGGCGGCTA AGGAATTGAT AGCTATGGGG CGTTTTGCGG AGGCTGAGGA AAAATTTCTA
CAGGCTTTGC AAAGGAATCC CAATGATTTA ACGACCTTGC TCCAGGGCGG AATTTTAGCC
AGTCAACAGG GAAATAGAGA GTTAGCTCTG GAGAGATTTG AGCGAGTGAT TAAATTTTAT
CATCCTCAAA AAGCTATTGA TGCTTATATA CTGGCGGCAG TGGAGTTAAA GAATTTGAGT
CGGGAGAGTG AAGCGATCGC CAAGTACGAA GAGATTGTAA GTTTCCATCA GCAGCGTGGT
TTATATCCAG AGGTTAAACT ACTGGGGACA TCTTTAACTT CTATTCAGGA ATTAGGTTTG
CTGCTCGACC GACTGGTTAC GAAACAACCG GATAGTATTA AGGATATTGT TTCTTTAGCT
AACTTAACAG ATAAAGTACT ATTTTATTGG AGAAGTAATC ATCTTGCCCC CGTAGCGAAG
GATGCTCCTC CCTTGCTGCC AAAATTAAAG ATATTAAAAG AATTGTTTTC CCAAGTTATT
GCTACTCAAG AGGTTCCTAA AAAGTCCTAT TTGTTAATAT TAAAACACTT CAATATGGCT
ATCCAACTTC TGAAAGAAGA ATCCCAGAGA TTAAATAGTA GCGAGTATAA AAGGGTTAAA
CTAATTCGCT CGGAAATTCC ACTGCCATTG ATGGATAAGT TGTGTTTTGA TGGTTTGTCA
TCGTCGGTAC GCTATATAAT GGGCGCGGAC GAACGGGTGC CAAAATTTCA GGTACAAGCT
ACGGTCAAAT ATTTACCCGA GTTAATGGAT CGAGATAAGG AGTATTTTGT AGCTACCGTG
CGGAAATTGT CAGGTTCGTT TAAGTTGAGA AGCAGGCAAA CCATAGAGAT ATTTAAGGAT
TTTATTTGCG AGTCTCCATT TTGTGTTTCT GAGGGATATA TTTTTCATCG TTGTGACCCG
AGAATATCTG ATAAATTTGT TAAGGAATTT ATTGGTGAAA AGACTGCCAG TTCGAGGGAA
GACGTTGCGC CAGATGATAA TTATAGTCAG ATGGCAAATA CTAGAGCAAC TTTAGAGGAG
ATTGCTATTA GGAAAACAGT ACTGGATAAT TATTACGAAG ATGATGTAAT TTTCAGTTTG
GCTGTTATCG GTCATATTTG GGGTGCATAT CAGAACTACG CCCATTTACT CCTAGACCAA
ATTCCTAGCT TAATTCTCTA TCAAAAGCTG AATTTATCCT GCCCAATATT TGTTCCCCAA
ATTACGGATA GCCACTGGGA AATCTTTAGT CATTTGAACA TACCAAAAGA GAAAATTTTG
GTAAAGCAAG AGCAGAAGTT TAAATACTTG ATAATTAGTC GTTATCAATA CGATATAGAC
AGGATTGATT TTTACAGACA ATTGAGAGAA TCAATTGTTG CAAAGCGTTC GGATATACCT
CCAGAATATC GCGCTCGTTA TGTGTATATT TCCAGAAGGT ATTCTCCTCG CCGACCGATG
GCTAACGAGG TAGAAGTAGA AGAATTGATG GCGAGTTTGG GATTTTCGAT TGTTTATGCC
GAAAGGTTGA GTTTTGAGGA GAAAGCGATG TTAATGCACC ACACTTCTGT TTTAGTTGGT
GCTATTGGCG CAGGGTTGAG CTGCATTCTT ATGTGTCATC CAAATACCAC TGTTGTCGAG
ATATTCACCG GTAGATACCT TATAGATAGG TTTTTTTACC CTGTATCTGT ATTGGGCCAA
CATAATTTTT ACCCACTATA TTGCGACCAA ACGCTCAATG GTTTTGAAAT GAATATAGAT
AAATTGAAAA GAGTAATTAC CGCAATACTT AAAGGGCAAT GA
 
Protein sequence
MATNNSLKIA NKLLQAGKLE DAQKEYQKLI ELQPNFAWNY YYLGQLFFQQ GKWQDAVTQY 
RKAIKLNPNS ATLHNSLAEA LIEQGKLDEA INYSQKAIFL EPDLAIYNQT LALAYEAKLD
LWQAFKTWQK ILSLHPNHSL ATQKISRLET DIALNCIDNG NKLNEAGKIK EAVEFYQQAL
ILNPQQPMSI YRSCGNNLMT LGKFESAERV FQQLIKFYPE LPDGYDGYAR VTQSLGDWEL
ALKRWSEAIF KFPENIGFQV QKGNTLINLA RFDEAKAVFQ HLKEKYPNQP QGYENYARLI
HRLGDGELAL KLWSEAIIKF PKPIVFQVQK GNALINLSRF DEAEAVFQQL KEKYPNRPHG
YERYAALTQS LGDWELALKR WSEAVFKFPE NIDFQVQKGN ALINLSRFDE AEAVFQQLKE
KYPNRPHGYE RYAALTQSLG DWELALKRWS EAVFKFPENI DFQVQKANAL INLSRFDEAE
AVFQQLIEKY PNQPDGYERC AALTQSLGDW ELALERWENA IAKFPGHFNF YLQKGDVLAN
LFRYEEAEIW WEKVIALYPA RHEGLYKSAA LARLLGNREF AWQRFEQAIE KFPGHIPAYC
EAAKELIAMG RFAEAEEKFL QALQRNPNDL TTLLQGGILA SQQGNRELAL ERFERVIKFY
HPQKAIDAYI LAAVELKNLS RESEAIAKYE EIVSFHQQRG LYPEVKLLGT SLTSIQELGL
LLDRLVTKQP DSIKDIVSLA NLTDKVLFYW RSNHLAPVAK DAPPLLPKLK ILKELFSQVI
ATQEVPKKSY LLILKHFNMA IQLLKEESQR LNSSEYKRVK LIRSEIPLPL MDKLCFDGLS
SSVRYIMGAD ERVPKFQVQA TVKYLPELMD RDKEYFVATV RKLSGSFKLR SRQTIEIFKD
FICESPFCVS EGYIFHRCDP RISDKFVKEF IGEKTASSRE DVAPDDNYSQ MANTRATLEE
IAIRKTVLDN YYEDDVIFSL AVIGHIWGAY QNYAHLLLDQ IPSLILYQKL NLSCPIFVPQ
ITDSHWEIFS HLNIPKEKIL VKQEQKFKYL IISRYQYDID RIDFYRQLRE SIVAKRSDIP
PEYRARYVYI SRRYSPRRPM ANEVEVEELM ASLGFSIVYA ERLSFEEKAM LMHHTSVLVG
AIGAGLSCIL MCHPNTTVVE IFTGRYLIDR FFYPVSVLGQ HNFYPLYCDQ TLNGFEMNID
KLKRVITAIL KGQ