Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2266 |
Symbol | |
ID | 4243359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3524520 |
End bp | 3528161 |
Gene Length | 3642 bp |
Protein Length | 1213 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638107367 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_721967 |
Protein GI | 113475906 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4421] Capsular polysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACAA ATAATTCCCT TAAAATCGCT AACAAATTAT TGCAGGCGGG TAAATTAGAA GATGCCCAAA AAGAGTATCA AAAACTCATC GAATTACAGC CCAATTTTGC TTGGAATTAC TATTACTTGG GGCAGTTGTT TTTTCAACAA GGAAAATGGC AGGATGCAGT TACCCAATAT AGAAAAGCCA TTAAACTCAA TCCTAATTCT GCTACCTTGC ACAATAGTTT AGCGGAGGCT TTAATAGAGC AAGGGAAATT AGATGAGGCT ATTAACTATT CGCAAAAAGC TATTTTTCTA GAGCCAGACT TGGCTATTTA TAATCAAACT TTAGCCTTAG CTTATGAGGC TAAATTAGAT TTATGGCAGG CATTCAAGAC TTGGCAAAAA ATCCTTTCTC TTCATCCAAA TCACTCTCTG GCAACTCAAA AAATCTCTCG CTTGGAAACA GATATTGCTC TCAATTGTAT CGATAACGGG AATAAATTAA ACGAGGCAGG AAAGATCAAG GAAGCTGTTG AATTTTATCA ACAAGCATTA ATTCTGAATC CTCAACAACC GATGTCTATT TATCGTAGTT GTGGTAATAA TTTAATGACT TTAGGCAAAT TTGAGTCAGC AGAAAGGGTT TTTCAACAAT TAATAAAATT TTATCCAGAA CTACCAGATG GTTATGATGG TTATGCCAGG GTAACTCAGA GTTTAGGGGA TTGGGAACTA GCATTAAAAC GGTGGTCGGA GGCGATTTTT AAATTCCCCG AAAATATCGG TTTTCAAGTT CAAAAAGGTA ATACTTTAAT CAATTTAGCC AGATTTGATG AAGCAAAAGC GGTATTTCAA CATTTAAAAG AAAAGTATCC AAATCAACCT CAAGGTTATG AGAATTATGC GAGATTAATT CATAGGTTAG GTGATGGGGA GTTGGCATTA AAATTGTGGT CAGAGGCGAT TATTAAATTT CCTAAACCTA TCGTTTTTCA AGTTCAAAAA GGCAATGCCT TAATCAATTT ATCTCGTTTT GATGAGGCAG AAGCGGTTTT TCAACAATTA AAAGAAAAGT ATCCAAATAG ACCTCATGGT TACGAACGTT ATGCAGCTTT AACTCAGAGT TTAGGGGATT GGGAATTGGC ATTAAAACGG TGGTCGGAGG CGGTATTCAA ATTTCCCGAA AATATTGATT TTCAAGTTCA AAAAGGCAAT GCCTTAATCA ATTTATCTCG TTTTGATGAG GCAGAAGCGG TTTTTCAACA ATTAAAAGAA AAGTATCCAA ATAGACCTCA TGGTTACGAA CGTTATGCAG CTTTAACTCA GAGTTTAGGG GATTGGGAAT TGGCATTAAA ACGGTGGTCG GAGGCGGTAT TCAAATTTCC CGAAAATATT GATTTTCAAG TTCAAAAAGC CAATGCTTTA ATCAATTTAT CTCGTTTTGA TGAGGCAGAA GCGGTTTTTC AACAGTTAAT AGAAAAGTAT CCAAATCAGC CTGATGGTTA TGAACGTTGT GCAGCTTTAA CTCAGAGTTT AGGGGATTGG GAGTTGGCTT TGGAGCGTTG GGAAAATGCT ATTGCTAAGT TTCCCGGCCA TTTTAATTTT TATTTGCAAA AAGGGGATGT ACTGGCTAAT TTGTTTAGGT ATGAGGAAGC AGAAATTTGG TGGGAAAAAG TTATTGCTTT ATATCCCGCT CGCCATGAAG GATTATACAA AAGTGCTGCT TTGGCGAGGC TGTTGGGAAA TCGGGAGTTT GCCTGGCAAA GGTTTGAACA AGCGATCGAA AAGTTCCCTG GGCATATTCC GGCATACTGT GAGGCGGCTA AGGAATTGAT AGCTATGGGG CGTTTTGCGG AGGCTGAGGA AAAATTTCTA CAGGCTTTGC AAAGGAATCC CAATGATTTA ACGACCTTGC TCCAGGGCGG AATTTTAGCC AGTCAACAGG GAAATAGAGA GTTAGCTCTG GAGAGATTTG AGCGAGTGAT TAAATTTTAT CATCCTCAAA AAGCTATTGA TGCTTATATA CTGGCGGCAG TGGAGTTAAA GAATTTGAGT CGGGAGAGTG AAGCGATCGC CAAGTACGAA GAGATTGTAA GTTTCCATCA GCAGCGTGGT TTATATCCAG AGGTTAAACT ACTGGGGACA TCTTTAACTT CTATTCAGGA ATTAGGTTTG CTGCTCGACC GACTGGTTAC GAAACAACCG GATAGTATTA AGGATATTGT TTCTTTAGCT AACTTAACAG ATAAAGTACT ATTTTATTGG AGAAGTAATC ATCTTGCCCC CGTAGCGAAG GATGCTCCTC CCTTGCTGCC AAAATTAAAG ATATTAAAAG AATTGTTTTC CCAAGTTATT GCTACTCAAG AGGTTCCTAA AAAGTCCTAT TTGTTAATAT TAAAACACTT CAATATGGCT ATCCAACTTC TGAAAGAAGA ATCCCAGAGA TTAAATAGTA GCGAGTATAA AAGGGTTAAA CTAATTCGCT CGGAAATTCC ACTGCCATTG ATGGATAAGT TGTGTTTTGA TGGTTTGTCA TCGTCGGTAC GCTATATAAT GGGCGCGGAC GAACGGGTGC CAAAATTTCA GGTACAAGCT ACGGTCAAAT ATTTACCCGA GTTAATGGAT CGAGATAAGG AGTATTTTGT AGCTACCGTG CGGAAATTGT CAGGTTCGTT TAAGTTGAGA AGCAGGCAAA CCATAGAGAT ATTTAAGGAT TTTATTTGCG AGTCTCCATT TTGTGTTTCT GAGGGATATA TTTTTCATCG TTGTGACCCG AGAATATCTG ATAAATTTGT TAAGGAATTT ATTGGTGAAA AGACTGCCAG TTCGAGGGAA GACGTTGCGC CAGATGATAA TTATAGTCAG ATGGCAAATA CTAGAGCAAC TTTAGAGGAG ATTGCTATTA GGAAAACAGT ACTGGATAAT TATTACGAAG ATGATGTAAT TTTCAGTTTG GCTGTTATCG GTCATATTTG GGGTGCATAT CAGAACTACG CCCATTTACT CCTAGACCAA ATTCCTAGCT TAATTCTCTA TCAAAAGCTG AATTTATCCT GCCCAATATT TGTTCCCCAA ATTACGGATA GCCACTGGGA AATCTTTAGT CATTTGAACA TACCAAAAGA GAAAATTTTG GTAAAGCAAG AGCAGAAGTT TAAATACTTG ATAATTAGTC GTTATCAATA CGATATAGAC AGGATTGATT TTTACAGACA ATTGAGAGAA TCAATTGTTG CAAAGCGTTC GGATATACCT CCAGAATATC GCGCTCGTTA TGTGTATATT TCCAGAAGGT ATTCTCCTCG CCGACCGATG GCTAACGAGG TAGAAGTAGA AGAATTGATG GCGAGTTTGG GATTTTCGAT TGTTTATGCC GAAAGGTTGA GTTTTGAGGA GAAAGCGATG TTAATGCACC ACACTTCTGT TTTAGTTGGT GCTATTGGCG CAGGGTTGAG CTGCATTCTT ATGTGTCATC CAAATACCAC TGTTGTCGAG ATATTCACCG GTAGATACCT TATAGATAGG TTTTTTTACC CTGTATCTGT ATTGGGCCAA CATAATTTTT ACCCACTATA TTGCGACCAA ACGCTCAATG GTTTTGAAAT GAATATAGAT AAATTGAAAA GAGTAATTAC CGCAATACTT AAAGGGCAAT GA
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Protein sequence | MATNNSLKIA NKLLQAGKLE DAQKEYQKLI ELQPNFAWNY YYLGQLFFQQ GKWQDAVTQY RKAIKLNPNS ATLHNSLAEA LIEQGKLDEA INYSQKAIFL EPDLAIYNQT LALAYEAKLD LWQAFKTWQK ILSLHPNHSL ATQKISRLET DIALNCIDNG NKLNEAGKIK EAVEFYQQAL ILNPQQPMSI YRSCGNNLMT LGKFESAERV FQQLIKFYPE LPDGYDGYAR VTQSLGDWEL ALKRWSEAIF KFPENIGFQV QKGNTLINLA RFDEAKAVFQ HLKEKYPNQP QGYENYARLI HRLGDGELAL KLWSEAIIKF PKPIVFQVQK GNALINLSRF DEAEAVFQQL KEKYPNRPHG YERYAALTQS LGDWELALKR WSEAVFKFPE NIDFQVQKGN ALINLSRFDE AEAVFQQLKE KYPNRPHGYE RYAALTQSLG DWELALKRWS EAVFKFPENI DFQVQKANAL INLSRFDEAE AVFQQLIEKY PNQPDGYERC AALTQSLGDW ELALERWENA IAKFPGHFNF YLQKGDVLAN LFRYEEAEIW WEKVIALYPA RHEGLYKSAA LARLLGNREF AWQRFEQAIE KFPGHIPAYC EAAKELIAMG RFAEAEEKFL QALQRNPNDL TTLLQGGILA SQQGNRELAL ERFERVIKFY HPQKAIDAYI LAAVELKNLS RESEAIAKYE EIVSFHQQRG LYPEVKLLGT SLTSIQELGL LLDRLVTKQP DSIKDIVSLA NLTDKVLFYW RSNHLAPVAK DAPPLLPKLK ILKELFSQVI ATQEVPKKSY LLILKHFNMA IQLLKEESQR LNSSEYKRVK LIRSEIPLPL MDKLCFDGLS SSVRYIMGAD ERVPKFQVQA TVKYLPELMD RDKEYFVATV RKLSGSFKLR SRQTIEIFKD FICESPFCVS EGYIFHRCDP RISDKFVKEF IGEKTASSRE DVAPDDNYSQ MANTRATLEE IAIRKTVLDN YYEDDVIFSL AVIGHIWGAY QNYAHLLLDQ IPSLILYQKL NLSCPIFVPQ ITDSHWEIFS HLNIPKEKIL VKQEQKFKYL IISRYQYDID RIDFYRQLRE SIVAKRSDIP PEYRARYVYI SRRYSPRRPM ANEVEVEELM ASLGFSIVYA ERLSFEEKAM LMHHTSVLVG AIGAGLSCIL MCHPNTTVVE IFTGRYLIDR FFYPVSVLGQ HNFYPLYCDQ TLNGFEMNID KLKRVITAIL KGQ
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