| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2260 |
|---|
| Symbol | |
|---|
| ID | 4243353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 3517321 |
|---|
| End bp | 3518097 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638107361 |
|---|
| Product | glucose-1-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_721961 |
|---|
| Protein GI | 113475900 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.478249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAG TTATTCTAGC GGGTGGTATT GGTACTCGTC TGAGAGAAGA AACTGAATAT
CGTCCTAAAC CATTGGTGGA AGTGGGAGGA TATCCCATTA TTTGGCACAT AATGAAGCTT
TATGCCCATT ATGGCTTTTT AGATTTTATT ATTTGTTTGG GCTATAAGGG CAATTTAATT
AAAGATTATT TTCTTAATTA CGAAGCCATA AATAATGACT TCACTATTAA TTTAGGTCGT
TCTCAGAAAA TTACTTATCA CAAAGCCTAT AATGAACAGG ATTTTCGGGT TACTTTGGTC
AATACCGGTC TGGAAACTAT GACGGGGGGG CGAGTGGTTA AGGTCAAACC ATATATTGAT
GAAGATTTAT TTATGGTGAC TTATGGGGAT GGTCTGGCAG ATGTTAATAT TAGAAATTTG
GTGGAATTTC ACAAGGGTCA TGGAAAAATG GCTACGACTA CTACGGTGCA ACCCCTTTCT
CGTTACGGGG TTTTAGATGT TGACAGGGAA GCTAGGGTTT TAAAGTTTGG GGAGAAGATT
AAAGATGATA AAATGGTCAG CGCTGGTTTT TTTGTTTTTG ACCGTCGGGT TTTTGACTAT
TTATCTGGGG ATAATTGCGT TTTAGAAAAA GACCCATTAG AAAAGTTGGC GACAGAAGGT
CAATTAATGG GTTATTATCA TTCTGGTTTC TTTTACGCCA TGGATACTTT TAAGGAATAT
CAAGAGTTAA ATAAGATGTG GAAGTTGGGT CAAGCGCCTT GGAAGATTTG GGAATGA
|
|---|
| Protein sequence | MKVVILAGGI GTRLREETEY RPKPLVEVGG YPIIWHIMKL YAHYGFLDFI ICLGYKGNLI
KDYFLNYEAI NNDFTINLGR SQKITYHKAY NEQDFRVTLV NTGLETMTGG RVVKVKPYID
EDLFMVTYGD GLADVNIRNL VEFHKGHGKM ATTTTVQPLS RYGVLDVDRE ARVLKFGEKI
KDDKMVSAGF FVFDRRVFDY LSGDNCVLEK DPLEKLATEG QLMGYYHSGF FYAMDTFKEY
QELNKMWKLG QAPWKIWE
|
|---|
| |