| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2254 |
|---|
| Symbol | |
|---|
| ID | 4243347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 3506525 |
|---|
| End bp | 3507313 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638107356 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_721956 |
|---|
| Protein GI | 113475895 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0121] Predicted glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR03442] conserved hypothetical protein TIGR03442 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0610184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAGAT TATTAGGTTA TCTTGGTGAG CCAATCTTAT TAGAGTCCAT TCTTACTCAA
CCAAAACACT CGTTAATAGT CCAAAGTTAT CAACCCCAAG AAATGCAAGA GTCATTACTA
AATGCTGATG GATTTGGATT AGGTTGGTAT GATACTCAAA AGCAGACTTC ACCTTTTACT
TATAAAAATA CCCAACCTAT TTGGAATGAT ATAAATCTTA AGAGTCTTGG TGGTTATATA
GAGTCAGGCT GTATTCTAGG TTATGTTAGA AGTGCAACTC TTGGTCAAGG AATTGATATC
AGTAACTGTC AGCCATTTAA TTACAAAAAT ATACTATTTA TTCACAATGG CTATATTGAT
CAATTTCGAT CTACTCTTTA TAAACCCATA CGGGATTCTC TCCAAGATAT TCCATATTTA
TTGATTAACG GTAATACGGA CTCTGAACAT ATTTTTGCTT TGTTAATTAA TGAAGTTCTT
GAAATAATTA AGTATAACTT TCAAGAAGCT TTACATAATA TATTAATGTT TTTGAAAAAA
ATTGCTCAGG AAAATAAAGT CAAATTTTTG GCAAATACAA TTATTACAGA CGGACATCAA
TTAGTTGCTT CTAGATTTGC TCAAGAGGCA AGTTCACCTA GTCTTTATTG GTTAAAAAAT
TCTTCTAAAT TTCCTAATTC TGTAATTATA GCTTCCGAAC CTTTGTTTGC AGATGATTGG
CAAAAGTTTC CAGAACAAAG TATCACTAAA GTCAGTGAAA ATCTTGATAT TCAGATCTAT
CAAATATGA
|
|---|
| Protein sequence | MCRLLGYLGE PILLESILTQ PKHSLIVQSY QPQEMQESLL NADGFGLGWY DTQKQTSPFT
YKNTQPIWND INLKSLGGYI ESGCILGYVR SATLGQGIDI SNCQPFNYKN ILFIHNGYID
QFRSTLYKPI RDSLQDIPYL LINGNTDSEH IFALLINEVL EIIKYNFQEA LHNILMFLKK
IAQENKVKFL ANTIITDGHQ LVASRFAQEA SSPSLYWLKN SSKFPNSVII ASEPLFADDW
QKFPEQSITK VSENLDIQIY QI
|
|---|
| |