| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2253 |
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| Symbol | |
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| ID | 4243346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 3503654 |
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| End bp | 3505279 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638107355 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_721955 |
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| Protein GI | 113475894 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.412449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCA GTCAAGACCG AGTTATTATT TTTGATACTA CCCTCAGGGA TGGAGAACAA
TCTCCAGGAG CAACTCTCAA TATAGATGAA AAATTGACCA TTGCTCGACA ACTATCTCTT
TTGGGAGTAG ACGTCATTGA AGCTGGTTTC CCCTATGCTA GTATTGGGGA TTTTGAGGCA
GTACAAAAAA TTGCTGAGAT AGTGGGAGTA GAAGGAGGCC CAACTATTTG CGGTTTGGCA
AGAACAACTC GTGCAGATAT TGAGGCAGCA GGTAAAGCCC TTAAACCAGC AGCTAAAGCG
CGTATTCATA CCTTTATTGC TACCTCTGAT ATTCACTTAG CTTACAAACT GAAGAAAACT
AGAGCAGAAG TATTGGAGAT TGCTTCAGAA ATGGTTGCCT ATGCTAAAAC CTTTGTAGAC
GATGTAGAGT TTTCTCCGGA AGATGCGGGT CGCTCTGACC CAGAATTTCT TTATCAAGTA
TTGGAAAAGG CGATCGCTGC TGGAGCTACT ACTGTGAATA TTCCTGATAC TGTAGGTTAT
ACAACTCCTG CTGAGTTTGG GGGGCTGATC CGGGGTATTA AAGAAAATGT ACCAAATATT
GACCAAGCTA TTATTTCAGT TCACGGTCAC AATGATTTGG GTTTGGCAGT CGCTAATTTT
CTGGAAGCAG TGAAAAATGG GGCTCGTCAG TTAGAATGTA CTATCAATGG CATTGGGGAA
CGTGCTGGTA ATGCTGCTTT AGAAGAATTG GTAATGGCGT TTCACGTTCG GCGACAATAT
TTCAACCCAT TTTTTGGTCG CCCACCAGAG TCAGAAACAC CACTAACTAA TATTAATACT
CGTCATATTT ACAAAACATC TCGTTTGGTT TCTAGTTTGA CAGGAATGTT CGTGCAACCA
AATAAAGCTA TTGTTGGTGC TAATGCTTTT GCTCACGAGT CAGGTATTCA CCAAGATGGG
GTACTCAAAA ATAAACTGAC CTATGAAATT ATGGATGCTC AGTCAATTGG GTTGACAGAT
AATCAGATTG TTTTGGGTAA ACTTTCGGGT CGTCATGCTT TCCAAAGTAG GTTGCAAGAG
CTTGGGTTTA AACTTTCAGA TGAAGAAATT AATAAGGCGT TTATCAAGTT CAAAGACTTG
GCAGATAAAA AGAAAGAAAT AACAGATTGG GATTTGGAAT CTATTGTTAA TGCTGAAATT
CAACAACCAC CGGAACTATT CCGTTTGGAG TTGGTGCAGG TTTCTTGTGG CGATCGCTCT
CGCCCTACAG CTACAGTTAT TATCCGCACT CCCAATGGGG AAGAATTAAC TGATGCTGCC
ATTGGTACTG GTCCTGTAGA TGCTGTGTAC AAAGCAATTA ACCGAGTGGT GAATGTAGAA
AATGATTTAG TTGAGTTTTC TGTGCAGTCT GTAACTGCTG GTATTGATGC TATTGGGGAA
GTCACTATTC GCGTGCGCCA TGAAGGGCGG GTTTATTCTG GTCATGCTGC TAATACTGAT
ATTATTGTGG CATCTGCTGA GGCTTATCTA AGTGCTTTAA ATCGGTTGTA TGCAGTTTTG
CAAAGAGGTG TAGAGAAAAT AAATTTACCA AAGGATCAAC CTACGGAAGT AGTAGCTGGT
AGTTGA
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| Protein sequence | MITSQDRVII FDTTLRDGEQ SPGATLNIDE KLTIARQLSL LGVDVIEAGF PYASIGDFEA
VQKIAEIVGV EGGPTICGLA RTTRADIEAA GKALKPAAKA RIHTFIATSD IHLAYKLKKT
RAEVLEIASE MVAYAKTFVD DVEFSPEDAG RSDPEFLYQV LEKAIAAGAT TVNIPDTVGY
TTPAEFGGLI RGIKENVPNI DQAIISVHGH NDLGLAVANF LEAVKNGARQ LECTINGIGE
RAGNAALEEL VMAFHVRRQY FNPFFGRPPE SETPLTNINT RHIYKTSRLV SSLTGMFVQP
NKAIVGANAF AHESGIHQDG VLKNKLTYEI MDAQSIGLTD NQIVLGKLSG RHAFQSRLQE
LGFKLSDEEI NKAFIKFKDL ADKKKEITDW DLESIVNAEI QQPPELFRLE LVQVSCGDRS
RPTATVIIRT PNGEELTDAA IGTGPVDAVY KAINRVVNVE NDLVEFSVQS VTAGIDAIGE
VTIRVRHEGR VYSGHAANTD IIVASAEAYL SALNRLYAVL QRGVEKINLP KDQPTEVVAG
S
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