Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2250 |
Symbol | |
ID | 4243343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3498817 |
End bp | 3499671 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638107352 |
Product | peptidase M48, Ste24p |
Protein accession | YP_721952 |
Protein GI | 113475891 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.581419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAA AACTATCTTT GATTTCTCAG TCCTCCTATC GTAGAATATT ATACCCATTA ATATCTGTGA TAGTCGCTGT TAGTTTATGG ACAGGTACAG TACTTCCCAG CCAAGCTATT CCCTGGAGAG AATTAATTTT TCGCAGTATT CAAATGATCT CAATTTCTAA CCTGTCTAAA ACTCAAGAAG TTGAACTAGG TAAACAAATT AATCAACAGT TATTGGAAAG TGGAAATATT AAACTTTATC GCGATCGCGC AGCTAAGAAA TATATTGATA GAATTGGGCA AAGATTAGTT TTAGCAAGTC CCCGCTCAGA TATTCCCTAT ACTTTTCAGG TAGTAGAGGA TGATAGTATA AATGCTTTTG CTACTATGGG AGGCTTTGTT TACATCAATA CTGGTTTAAT GAAAGCTGCC GATAATGAAG CAGAATTAGC TAGTGTTATT GCTCATGAAA TTGCTCATAT TGCCGATCGC CATGCACTAA AACAATTACG TCAAACATTA TTAGCACAAG GTTTAGCGAC TGCAGCAGGT GTAGATAATA GTGTTGCAGT TCAAATAGCG GTAGAATTAG CATTACGTCG CCCCAAAAGC CGCCAGGCAG AATTTGAAGC TGATCAAATT GGAATTGAAA CATTAGGAAA AGCAGGATAT GCTCAATATG CTGCAATTAC ATTTATGCAA AAATTGTTGA AAAAATCTTC GCCGCCATCT TTTCTTAGCA CTCACCCAGC AACATCGACG CGAATTTCTC AGATGAAACA AATGATTAAT CCTGAATTTG CCTATAATGG TGATGGGTTA GATGATAGAC GTTATCAGGT AATTTTAAAT AGGTTGCTGC CCTAG
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Protein sequence | MLKKLSLISQ SSYRRILYPL ISVIVAVSLW TGTVLPSQAI PWRELIFRSI QMISISNLSK TQEVELGKQI NQQLLESGNI KLYRDRAAKK YIDRIGQRLV LASPRSDIPY TFQVVEDDSI NAFATMGGFV YINTGLMKAA DNEAELASVI AHEIAHIADR HALKQLRQTL LAQGLATAAG VDNSVAVQIA VELALRRPKS RQAEFEADQI GIETLGKAGY AQYAAITFMQ KLLKKSSPPS FLSTHPATST RISQMKQMIN PEFAYNGDGL DDRRYQVILN RLLP
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