Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2224 |
Symbol | |
ID | 4243258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3468868 |
End bp | 3469581 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638107326 |
Product | peptidase M15D, vanX D-ala-D-ala dipeptidase |
Protein accession | YP_721926 |
Protein GI | 113475865 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2173] D-alanyl-D-alanine dipeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.288843 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTT ACCAAAAAAT TAAAATTCAA GAATGTAACG AGCCCTTAGT TCCAATTCCC TTAGAATTAT TTGCCATAGA ATCACCTCAT CCCTATCAAA AACTAGGTGC TCCCTATCAT CTTTCTCAAA CAAAATCACC TTATTTTTTA CGTCAAAAAG TATTAGATAG CTTAATAACA GCTCAAACAA AATTACAACA AAATTATCCC AGTTGGCAAA TCCAAATATT TGATGCTTAT CGCCCTATTA TCATACAAAA ATTTATGGTA GATTATACTT TTACAGAAAC AGTAAAAGCT CATGGTTTAA CATTAGATAG TCCGTCTTTA ACCGAAGTAA AACGCCAAGA AATTTTAGAG CTAGTTTATC AGTTTTGGGC AACTCCCAAT TCAGATCCTA GGACACCACC ACCTCATAGC ACTGGTGCTG CTGTAGATGT CACCTTAGTT GATGCCAATG GCAAAATCAT TAATATGGGC TCTCCCATTG ATGAATTATC CCCTCGCTCC TATCCCAAAC ATTTTTTAGA GCTCCAGAAT GAAGAAGCTC AAAAATATCA TCAACATCGA CAATTATTAG CAGAAGTCAT GATATTTGGG GGGTTTCAAC AGCATCCACA GGAATGGTGG CATTTTTCCC TAGGCGACCA AATGTGGGCT TGGTTAACTA ATGATCAAGG TAAAGTTGTG GCCAGATATG GAAGAGTAGA GTAG
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Protein sequence | MKPYQKIKIQ ECNEPLVPIP LELFAIESPH PYQKLGAPYH LSQTKSPYFL RQKVLDSLIT AQTKLQQNYP SWQIQIFDAY RPIIIQKFMV DYTFTETVKA HGLTLDSPSL TEVKRQEILE LVYQFWATPN SDPRTPPPHS TGAAVDVTLV DANGKIINMG SPIDELSPRS YPKHFLELQN EEAQKYHQHR QLLAEVMIFG GFQQHPQEWW HFSLGDQMWA WLTNDQGKVV ARYGRVE
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