Gene Tery_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2224 
Symbol 
ID4243258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3468868 
End bp3469581 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content37% 
IMG OID638107326 
Productpeptidase M15D, vanX D-ala-D-ala dipeptidase 
Protein accessionYP_721926 
Protein GI113475865 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.288843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTT ACCAAAAAAT TAAAATTCAA GAATGTAACG AGCCCTTAGT TCCAATTCCC 
TTAGAATTAT TTGCCATAGA ATCACCTCAT CCCTATCAAA AACTAGGTGC TCCCTATCAT
CTTTCTCAAA CAAAATCACC TTATTTTTTA CGTCAAAAAG TATTAGATAG CTTAATAACA
GCTCAAACAA AATTACAACA AAATTATCCC AGTTGGCAAA TCCAAATATT TGATGCTTAT
CGCCCTATTA TCATACAAAA ATTTATGGTA GATTATACTT TTACAGAAAC AGTAAAAGCT
CATGGTTTAA CATTAGATAG TCCGTCTTTA ACCGAAGTAA AACGCCAAGA AATTTTAGAG
CTAGTTTATC AGTTTTGGGC AACTCCCAAT TCAGATCCTA GGACACCACC ACCTCATAGC
ACTGGTGCTG CTGTAGATGT CACCTTAGTT GATGCCAATG GCAAAATCAT TAATATGGGC
TCTCCCATTG ATGAATTATC CCCTCGCTCC TATCCCAAAC ATTTTTTAGA GCTCCAGAAT
GAAGAAGCTC AAAAATATCA TCAACATCGA CAATTATTAG CAGAAGTCAT GATATTTGGG
GGGTTTCAAC AGCATCCACA GGAATGGTGG CATTTTTCCC TAGGCGACCA AATGTGGGCT
TGGTTAACTA ATGATCAAGG TAAAGTTGTG GCCAGATATG GAAGAGTAGA GTAG
 
Protein sequence
MKPYQKIKIQ ECNEPLVPIP LELFAIESPH PYQKLGAPYH LSQTKSPYFL RQKVLDSLIT 
AQTKLQQNYP SWQIQIFDAY RPIIIQKFMV DYTFTETVKA HGLTLDSPSL TEVKRQEILE
LVYQFWATPN SDPRTPPPHS TGAAVDVTLV DANGKIINMG SPIDELSPRS YPKHFLELQN
EEAQKYHQHR QLLAEVMIFG GFQQHPQEWW HFSLGDQMWA WLTNDQGKVV ARYGRVE