Gene Tery_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2216 
Symbol 
ID4243249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3453420 
End bp3455543 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content32% 
IMG OID638107318 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_721918 
Protein GI113475857 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.177421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGA AATTTCAATC CTCTTTTAAT AGGATTCTAT TGTCGCGAAT TTTACTACTT 
ACGATATCAG GACTAGTATT GGGTCAGTAT ATAATTTACA GACAAGCACG TTCTACTTTT
CTAAACACTG CTCGTCAAAA CCTTAAAGAA AGTGCAGATA GAAAAGCGGA ATATCTTCAA
CAATGGGCAA CATCACTAAA GTCAAGTCTA GTTAGTGCGA GTGAAAGCTA TGTACTTGAA
TCTGGTACAG TTGAAGAGCA TCAAAGTTAT ATTAAACGGT TAGACGAAAT GTTATCTACT
CAGATAAGTT GCGTTCAATT GAGTAACTTA CGGACTGAGG AGATCGTCGC GAATACTTGT
GGTACTGAAA GAATAGATTC TTTACCGGAA AATATATGGC CTCAACAGCA AAAACAACTT
TTTAGGGACA AGTATAATAT TTATGTGAGT TACAGCATCC TAGAACTGTT AAGCGCAGAT
AGCGAATCAA ATGGTCAGAA AGTAAATCAA AAAACACAAG TTAGCTTAGT TTGGAGTGTA
CCAGTGTATG TTAGTGAAGC TGGCGAAAGA AAATTGCGAT ATGCCTTAAG TATTAAGTCA
GCTTTACCAA TGCCAACAAA TAGAGAAAGA GGCTCATTTA CAGGTTCAAC TGTAGTAATT
AATGTCCCCG AGTACAGGAT ATTAGCTAGT CTAGATTCTA GGAAACTAGG GCGTAGGATT
TCTGAATTGT CAGACACACA GACTGCAAAG AAACTAGAAA GTATTATGAA AAAGGCAGAG
GAAGGTCAAA AACATTTTGC CCATATATTT TCTATTGAGG AAACAGATAT TCTGAGTAAA
AATCAGGGAA GTGATAGAAG TAAAAATACT TTCAGAGAAA TTATTGATAA ACTAAAAGAG
ATATTGCCTA AATTGTTAAG ACTTAAATTA TCAGAAGATA ATGAATTTTT AGCAGGGTAT
GTTGCTATTC CTAGCCCTAT AGATAGAGAT AATGATAAAG TGTGGGTTGT TTTAGCAATT
ACACCTATAG ATTTTGCTTT ATCTGGTCTT AGAGAAGTTC AAAAGGTTCT AATTATTCTA
ATTTTATTTT TACTTGGTGC TAGTATCATA GCAAGTATTT TTTTGGCTCG TGATTTAGCT
ATTCCTTTGA AGAAACTCCG AGATTATGCT ATTACTTTAA ATGATTTAAA TGCTCCCAGT
AAAGTACCTC AAGATCTAAA AATTCCTGAG TTTAATCAAC TAGCAGTTTC ATTACAGAAG
ATGGTAGAAA GGCTAAATAG GTGGGCTGAT AAAATAGAAG TAGCTTCTAA AGAAGCTCAG
GTTGCTAACC AGTTAAAAAG TGAATTTTTA GCTAATATTT CCCATGAGTT AAGAACTCCA
CTTAATGGTA TTATTGGTTC ACTGCAAATA ATTTATGATG GTTTTTGTGA TACTAGGGAA
GAAGAAATAC AGTTCTTGAA ACAAGCTAAT GATTCAGCTA TTCATTTGCT AAGAATTATT
GATGATATCC TGGATATTCG TAAAATTGAT GCAAGAAATT TATATATGAC ATTTGAGAAT
ATCAATATCA TCAAGTTATT AGAAGAAACT GTGGATATAT TTAGATACGA TCTTGAACAA
AAATCTTTGG TTTTAAAACT AAATGCTTCT GAAGAAAAAA TACTTGTTTA TGTTGACAAA
AAAGAGTTAC AGAAGGTTTT TGAAAATGTT ATTAGTAATG CTATTAAGTT TACAGAAAAA
GGAAATATTG ATATCTCTAT TTGTAGAAAA TATAATCAAT GTATTTTTTC TGAAAATCAG
AATAATTTAG TTAATGCTCA TACTCATAAA GTTAATCAAG TTTTAGTTAC TATTCAAGAT
ACAGGAATTG GTATTGATCC AGAAGAACAG GATAAATTAT TTCAGCCTTT TGTTATGGTA
GATGGTACAA AAACTCGTAA ATTTGGTGGA AATGGATTAG GATTAGCTAT GGCTCGCGGA
CTGGTGGAAA TGATGAATGG TAATATTCAT CTCTATAGTG AAGGTATAGG GCGAGGAACT
ACAGTTTATA TTACTATACC AATTCAGGAA AGATTATCAT TGGAGAAAAA ACAGGATATT
TCAACAGAAA TTAAATTGAA TTAA
 
Protein sequence
MIKKFQSSFN RILLSRILLL TISGLVLGQY IIYRQARSTF LNTARQNLKE SADRKAEYLQ 
QWATSLKSSL VSASESYVLE SGTVEEHQSY IKRLDEMLST QISCVQLSNL RTEEIVANTC
GTERIDSLPE NIWPQQQKQL FRDKYNIYVS YSILELLSAD SESNGQKVNQ KTQVSLVWSV
PVYVSEAGER KLRYALSIKS ALPMPTNRER GSFTGSTVVI NVPEYRILAS LDSRKLGRRI
SELSDTQTAK KLESIMKKAE EGQKHFAHIF SIEETDILSK NQGSDRSKNT FREIIDKLKE
ILPKLLRLKL SEDNEFLAGY VAIPSPIDRD NDKVWVVLAI TPIDFALSGL REVQKVLIIL
ILFLLGASII ASIFLARDLA IPLKKLRDYA ITLNDLNAPS KVPQDLKIPE FNQLAVSLQK
MVERLNRWAD KIEVASKEAQ VANQLKSEFL ANISHELRTP LNGIIGSLQI IYDGFCDTRE
EEIQFLKQAN DSAIHLLRII DDILDIRKID ARNLYMTFEN INIIKLLEET VDIFRYDLEQ
KSLVLKLNAS EEKILVYVDK KELQKVFENV ISNAIKFTEK GNIDISICRK YNQCIFSENQ
NNLVNAHTHK VNQVLVTIQD TGIGIDPEEQ DKLFQPFVMV DGTKTRKFGG NGLGLAMARG
LVEMMNGNIH LYSEGIGRGT TVYITIPIQE RLSLEKKQDI STEIKLN