Gene Tery_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2200 
Symbol 
ID4243233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3431712 
End bp3432260 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content39% 
IMG OID638107302 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_721902 
Protein GI113475841 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.506317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.426365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAA TAGCTGGTGA AATTGTAGAA CCTTATGCAG CAGCTCTGAT GTCCTTGGCT 
CAATCAAAAG ACTTGACTGA TAAATTTGCC GAAGATGTGC GGAGCCTGAT TAATATTCTG
GATGAATCCC CGGAATTTAA GCAATTTGTG GGAAATCCAG TTATTAAGCA AGAGGATAAA
AAAGCAGTGG TAAAACGCAT GCTGGGAGAA CAGGTTGATC CCTTAATGCG TAATTTCTTA
ATGCTACTAA TTGATAAAGG TCGGATTACT TTTCTAGAAC AGATAGGGAA ACAATACTTA
GCACTATTGC GTGAACTCAA TCAAACTGTT TTAGCAGAAG TGACCTCCAC AGTAGAATTG
AATGAAAACC AAAAAAATAC AATCCGTGAA CGAGTCAAAT CAATGACTAG TGCAAGGGAA
GTGGAAATAG AAACTAAAGT CGACCCAAGT ATATTGGGTG GTGTCATTAT CAAAATAGGT
TCTCAGATAA TTGACTCTAG TCTGCAAGGA CAACTGCGTC GTATTGGCAT CAGCCTCAAA
ACACTATAG
 
Protein sequence
MSVIAGEIVE PYAAALMSLA QSKDLTDKFA EDVRSLINIL DESPEFKQFV GNPVIKQEDK 
KAVVKRMLGE QVDPLMRNFL MLLIDKGRIT FLEQIGKQYL ALLRELNQTV LAEVTSTVEL
NENQKNTIRE RVKSMTSARE VEIETKVDPS ILGGVIIKIG SQIIDSSLQG QLRRIGISLK
TL