Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2196 |
Symbol | |
ID | 4242648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3422919 |
End bp | 3424724 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638107298 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_721898 |
Protein GI | 113475837 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.327991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAT TTCTGTTTGT CTGCTTATTC TTAATTGGGC TTGGTTGGGC CTTATCTAAC TTCTCTGGTT TGGCCAATAA AGGAGTCTAC GACTCAATTG TCTTAGACTT CCGTGAAGAT ATCGGAATTA CTAAAATTTT CGATCAAATC AGGACAATTT CTGATGAGTA CCAAGTCGCA CCTCGCCTAA ATAGTGAATT TTCAATATCA GATAATGTAT ATATTGTCAA GGGTAATCGC CAACTCCTCA AAAACCTCAA AAGTTCTCTA GGCAAATATA CTGAATACAT AGAACCAAAC TATATTTACA ATACCGATGC CATTATCTTG GATAGTGGTG ATGGCGTTCC TAACGATCCC ATGTATGGGA AACAATGGAA CCTGCGTAGC ATCAATGTCG AATCTGCCTG GAATGAAACC CAAGGCGACG GAATAACTGT AGCAGTAATT GATACAGGTG TTTCCAAAGT TCCCGACCTG GAAAAAACAA AATTTGTACC CGGGTACGAT TTTGTTAATG ATCGCACATT AGCTACTGAT GACAACGGTC ATGGTACTCA TGTTGCAGGC ACTATTGCCC AAGCTACTAA CAATAATTAT GGTGTAGCAG GTATCGCCTA CGAAGCTAGC ATCATGCCCC TAAAAGTCTT ATCTGCTAGT GGAGGTGGTA CAGTTTCCGA TATTGCCGAG TCTATAAAAT TCGCTGCTGA TAATGGTGCA GACATTATTA ATATGAGTCT AGGTGGTGGC GGTGAAAGCC AAATCATGAA AGAAGCAATT AATTATGCTC ATAATAAAGG TGTAGTTATC ATTGCTGCAG TAGGCAACGC TAACCAAAAT TCAGCCAGCT ACCCCGCTCG TTATCCTCAT GTTATTGGTG TCTCCGCCAC TGACGCTTCT GGAGAAAAAG CTCCATACTC CAATTTCGGT GCAGGGGTTG ATATTTCTGC TCCTGGCGGT TCCACTAAAG ATAAAAATGA AGCTGGCGGT ATCCTGCAAG AAACCATTAA CCCAGAAAAT GGCAACAGTG TATTTGCCTC CTTCCAAGGA ACAAGTATGG CATCTCCCCA CGTTGCAGGA GTGGTAGCAT TAATCAAATC TAGTGGAATT CAAGACCCAG AGGAAATTAC CAACATTCTC AAAAAATCTG CTAGAACTGT TAAAGAAGAC CCCCTCAACC ATTTTGGTGC AGGTCAGTTA GATGCAGCAG CAGCAGTCAA ATTGGCACTT AAAGGTCAAA TAACTTTCCG CGACTTCTTC CGGTGGTTAT ATGATAATGG TTATCTCAAT CCTGGTTTTT GGCTTGATGG TGGCGCCATA GCATTGTTGC CTAAGTTAGG AATGGTTTTA GGATCTTATA TATTAGCTTG GTTGCTGCGG AATTATTTTC CTTTCAGTTG GAGTTTTCCC TTACATACTG GATTAGTTGT AGGTAGCAGT GGGTTATTTT TCTTGCGTGG TTTCTATGTT TTTGATTTGC CCCAATGGCC AATGCGTTTA ATGGGTAGTT CTTTACCCGA ACTTGGTGGA GCTATTCAAG GTAGTGGTAT TTTGAATCCC ATTTTTGCTA GTGTATTGAT TCCAGCGTTA TTAATTCTGT TGTTATTAGG TCATCAGCAA TGGAAGTGGG TAGCGATCGG TACTACTATC GGTGTTGCTA GCTGTTTAAT TGTGAGTGCA GTTGTCGATC CTGCAGTTTG GGGATTAGGT ACTGGTATAA CAGCTCAAAT TTTCCTAGTT GTGAATGCCC TGTTATGCTT AGGTTTAGCA CGTTTGGCAA TTAGAACAGA GGAAAAGTTA GCATGA
|
Protein sequence | MKKFLFVCLF LIGLGWALSN FSGLANKGVY DSIVLDFRED IGITKIFDQI RTISDEYQVA PRLNSEFSIS DNVYIVKGNR QLLKNLKSSL GKYTEYIEPN YIYNTDAIIL DSGDGVPNDP MYGKQWNLRS INVESAWNET QGDGITVAVI DTGVSKVPDL EKTKFVPGYD FVNDRTLATD DNGHGTHVAG TIAQATNNNY GVAGIAYEAS IMPLKVLSAS GGGTVSDIAE SIKFAADNGA DIINMSLGGG GESQIMKEAI NYAHNKGVVI IAAVGNANQN SASYPARYPH VIGVSATDAS GEKAPYSNFG AGVDISAPGG STKDKNEAGG ILQETINPEN GNSVFASFQG TSMASPHVAG VVALIKSSGI QDPEEITNIL KKSARTVKED PLNHFGAGQL DAAAAVKLAL KGQITFRDFF RWLYDNGYLN PGFWLDGGAI ALLPKLGMVL GSYILAWLLR NYFPFSWSFP LHTGLVVGSS GLFFLRGFYV FDLPQWPMRL MGSSLPELGG AIQGSGILNP IFASVLIPAL LILLLLGHQQ WKWVAIGTTI GVASCLIVSA VVDPAVWGLG TGITAQIFLV VNALLCLGLA RLAIRTEEKL A
|
| |