| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2142 |
|---|
| Symbol | |
|---|
| ID | 4244115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 3345601 |
|---|
| End bp | 3346149 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638107249 |
|---|
| Product | putative methyltransferase |
|---|
| Protein accession | YP_721849 |
|---|
| Protein GI | 113475788 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0742] N6-adenine-specific methylase |
|---|
| TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.308596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA GAATATATGG TAACCGTCAG TTAAAAACTT TACCAGGAAT GGAAATTCGA
CCAACTTTGG CTAAGGTGCG AGAAGCAGTC TTTAATATCT GGCAAAATAA TATAGATGGA
TGTCGATGGC TCGATATATG TGCTGGTGTA GGTTCTATGG GAGCAGAAGC TTTATGTAGA
GGAGCATCCA TAGCGATCGC TATGGAACAA TATAGCCCTG CTTGTACTTT AATTCGCCAA
AATTGGCAAC TGGTGGCTAG TTCATCCCAG GAATTTCAGG TTTTGCGGGG AGATGTTTTA
AAACGGTTAA AAGTTTTAGT GGGCCAGAAG TTTGATTTGA TTTATTTTGA TCCCCCCTAT
ACTAGTAATT TATATCAACC AGTATTGGAG GCGATCGCTC AATATCAACT TCTAGGGCTA
ACCAGCGAGC TAGCAGTAGA ACATTGTCCC AAAATATGGC CAGTTAAATC TATTCCCAAT
TTAGAAATTT GTCGGCAGAA AGTCTATGGC AATACAGCTT TGACTTTCTT TCGTCTTTTT
CAGAACTGA
|
|---|
| Protein sequence | MNLRIYGNRQ LKTLPGMEIR PTLAKVREAV FNIWQNNIDG CRWLDICAGV GSMGAEALCR
GASIAIAMEQ YSPACTLIRQ NWQLVASSSQ EFQVLRGDVL KRLKVLVGQK FDLIYFDPPY
TSNLYQPVLE AIAQYQLLGL TSELAVEHCP KIWPVKSIPN LEICRQKVYG NTALTFFRLF
QN
|
|---|
| |