Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2127 |
Symbol | |
ID | 4244099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3323299 |
End bp | 3323946 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638107233 |
Product | phosphoglycerate mutase |
Protein accession | YP_721834 |
Protein GI | 113475773 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00711318 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTCAAC AAACAGTCTG GATAGCAAGA CACGGAAACC GTATCGACTT TGTTAACCCT GAATGGTTTA ACACTGCCAA AAGACCATAC GATCCCCATC TTTCAGATGA TGGCGTTGTT CAAGCACAAC AACTAGCAAA ACGTTTAATT GGGGAAAATA TCACCCAAAT TTTTGCTTCT CCCTTTTTAC GAACTGTACA AACTGCCAAT GAAATAGCAA AAGTTCTTGA TTTAGCCATC AAATTAGATT GGGGTTTATG TGAATGGTTA AATCCAAAAT GGATGCCTGC TATGCCAGAA ACCCTGTCTA GAGAAAATCT TGCCCAAACT TATCCTAGAA TCGACCTTTC TTACGATAGA GGTACTCCCA AATATCCCGA AACCTGGAAA GATTGTATGA AACGCACAGG AGAAGTTTCT AAGGGTTTGG TGAAAGAGTT TCCTACAGAA AATATTTTAT TGGTGGGGCA CGGTGTCTCA GTTATTGGTA CTGCTGCTGG ATTAGTTGGT GAAATTGCGG AAACTGAACT CAAGGCTCCT CTTTGTTGTT TGGTCAAAAT TGTTTTGCAA GAAGAGCAGT GGGTAATGGA ATTAAGTGGG GATACTTCCC ATCTAGATAA TAGAGAAACT ACTGTCAGGT TTGTTTAG
|
Protein sequence | MFQQTVWIAR HGNRIDFVNP EWFNTAKRPY DPHLSDDGVV QAQQLAKRLI GENITQIFAS PFLRTVQTAN EIAKVLDLAI KLDWGLCEWL NPKWMPAMPE TLSRENLAQT YPRIDLSYDR GTPKYPETWK DCMKRTGEVS KGLVKEFPTE NILLVGHGVS VIGTAAGLVG EIAETELKAP LCCLVKIVLQ EEQWVMELSG DTSHLDNRET TVRFV
|
| |