Gene Tery_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2120 
SymbolprfB 
ID4243956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3312612 
End bp3313478 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content40% 
IMG OID638107227 
Productpeptide chain release factor 2 
Protein accessionYP_721828 
Protein GI113475767 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAACTAG AAACAGATGA ATCTTTACTA GCAGAAGCTA ATTTAACAAT TGCTAATCTC 
AACCAGGAGT TAGACCAATG GGAGTTGCAG CAATTATTAT CTGGTCTATA TGACCAAAAT
GGAGCAGTGG TGACTATTAA TGCTGGGGCA GGAGGTACAG ATGCTCAAGA TTGGGCAGAA
ATGTTGTTGC GGATGTATAC TCGCTGGGGA GAAGAGCATA AGTATAAGGT GCAGTTGGCC
GAAATTTCTG AGGGGGATGA AGCAGGTCTT AAGTCTGCAA CTTTAGAAAT TATTGGTCGG
TATGCTTATG GTTACTTGAA GGCGGAAAAA GGTACTCATC GCTTAGTCAG AATTTCACCT
TTTAATGCTA ATGGCAAACG ACAAACTAGT TTTGCTGGTG TGGAGGTGAT GCCCATATTA
GACCATTCTG TAGAATTGGA TATTCCAGAG AAGGATCTCG AAATTACAAC TTCTCGTTCT
GGGGGTAAGG GTGGTCAAAA TGTGAATAAA GTAGAAACGG CGGTGCGAGT AGTTCATATT
CCTACAGGTC TTTCTGTGCG TTGTACCCAA GAGCGTAGTC AGTTACAAAA TAAGGATAAA
GCTTTGGCAT TATTGAAAGC TAGGTTACTG ATAATTGCTC AAGAGCAACG TGCTCAAGAA
ATTAATGAAA TTCGCGGTGA TATGGTAGAA GCTGCTTGGG GTAATCAAAT TCGTAACTAT
GTTTTCCATC CTTATCAAAT GGTTAAAGAT TTACGGACTC AGAAGGAAAC TACTGCTATT
AATGATGTGA TGAATGGTGA GTTAGACCAA TTTATTGAGG CTTATTTACG CCAGGAAAAT
CAAATGGTCG AAAGTCAGTC TACTTAA
 
Protein sequence
MELETDESLL AEANLTIANL NQELDQWELQ QLLSGLYDQN GAVVTINAGA GGTDAQDWAE 
MLLRMYTRWG EEHKYKVQLA EISEGDEAGL KSATLEIIGR YAYGYLKAEK GTHRLVRISP
FNANGKRQTS FAGVEVMPIL DHSVELDIPE KDLEITTSRS GGKGGQNVNK VETAVRVVHI
PTGLSVRCTQ ERSQLQNKDK ALALLKARLL IIAQEQRAQE INEIRGDMVE AAWGNQIRNY
VFHPYQMVKD LRTQKETTAI NDVMNGELDQ FIEAYLRQEN QMVESQST