| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2105 |
|---|
| Symbol | |
|---|
| ID | 4243941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 3280402 |
|---|
| End bp | 3281733 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638107213 |
|---|
| Product | sodium:galactoside symporter family protein |
|---|
| Protein accession | YP_721814 |
|---|
| Protein GI | 113475753 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.366774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.477059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTCA GCAAAAAAAC TATTGTAGCC TTTGTCTCTC CAGGAATACC CCTTTCTGCT
CTTGGCCTTC CTCTTTTAGT CTATCTTCCC CCATTTTATG CAGAAGAAAT GGGACTTGGC
CTGTCTCTAG TAGGCACAAT TTTTATGATT GCCCGTTTGT GGGACGTTTT TACTGATCCA
GTTCTTGGTG TTTTCAGCGA TCGAGTCACA ACTCCACTAG GTCGTCGGCG CCATTGGATT
ATATTATCTG TCCCTATTTT AATGATTTGT GTTTATAAAG TGTTTATGCC AGGAGCACAA
ATCACAGGAA ATTATCTTCT GTTTTGGATG CTGTTGTTGT ATGTCGGTTG GACTCTGCTG
AGTATCTCTC ATATGTCTTG GGGAGCAGAG TTATCATCAG ATTATTATGA GCGATCGCGA
GTTCAAGGTT GGCGAGAGTT TGCTTTAGTC TTTGGTATGT TAGCGGTTTT GATACTCCCA
ACTATTCTGG AACAGACTGG AGGTGTTGAT AGTAGTACGA AAGTTGCGGC TATGGGTTGG
TTTACAATTA TACTGCTGCC TATTACTGTA GCGTTCGCTG TGAGTAATGT TAAAGAAAGA
GCTGTGGAAC CATCTTGCCA ACTTGGTTTC TTTGAGTCAG CTTCTATACT GTTGAAAAAT
AAACTACTAA TACAGGTTCT ACTAGCAGAT TTAATGATTG GTCTAATTCC TGGAATTATT
GGATCAATCT ACATTTTTTT TGTGACTTAT GTCATGGAAT TAGGTGAACA GTCTAATTTG
ATGCTTTTAC TGTATTTTAC GGCTAGTTTT TGTGGAATTC CTGTTTGGAT GCGTCTTAGT
TATAAGTTGG AAAAGCATCG GACTTTTGGT GTTGCTAAAA TATATGGTTG TATAGTTCTT
GCTAGTTTAT TCCTTGTTCA ACCAGGAAAT TTATGGTTGT ATGCTTTGGT TAATATTCTT
TTCGGTATTG AATCTGGTTC GGGAGCATTT TTATTGCGCT CAATTATGGC AGATGTTACG
GACCATGATA ATTTGGAATC TGGGACACAA CGTACAGGTC TTTACTATTC ACTATTAACC
ATGACTACTA AAGTTGGTTC TGCTTTGGGA GTTGGGATAA TTTATCGTAT TTTAGATTGG
ATAGGTTTTG ACCCTGGGGT GGAAAATACT GCGGGAGCAA TTGAGGCTCT TAAATATATA
TTTATTTTTG TACCTATTCC CATTAGTATT TTGGCAGCGA TCGTTATCTG GAATTTTCCA
CTAGACAGCA CTCGACAAAA AGAATTACGT CGTTTACTGG CAGAACGTGA TTCTGTGATT
AGCTCAAAAT AA
|
|---|
| Protein sequence | MNLSKKTIVA FVSPGIPLSA LGLPLLVYLP PFYAEEMGLG LSLVGTIFMI ARLWDVFTDP
VLGVFSDRVT TPLGRRRHWI ILSVPILMIC VYKVFMPGAQ ITGNYLLFWM LLLYVGWTLL
SISHMSWGAE LSSDYYERSR VQGWREFALV FGMLAVLILP TILEQTGGVD SSTKVAAMGW
FTIILLPITV AFAVSNVKER AVEPSCQLGF FESASILLKN KLLIQVLLAD LMIGLIPGII
GSIYIFFVTY VMELGEQSNL MLLLYFTASF CGIPVWMRLS YKLEKHRTFG VAKIYGCIVL
ASLFLVQPGN LWLYALVNIL FGIESGSGAF LLRSIMADVT DHDNLESGTQ RTGLYYSLLT
MTTKVGSALG VGIIYRILDW IGFDPGVENT AGAIEALKYI FIFVPIPISI LAAIVIWNFP
LDSTRQKELR RLLAERDSVI SSK
|
|---|
| |