| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2089 |
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| Symbol | rph |
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| ID | 4243923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 3258626 |
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| End bp | 3259342 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638107199 |
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| Product | ribonuclease PH |
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| Protein accession | YP_721802 |
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| Protein GI | 113475741 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.504457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.102382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTGGC AACGTCCAGA TGGTAGAAAG TCAAACCAAT TACGTCCTAT TAGTTTTGAA
TTAGATTACA CTAAATTTGC CACCAGTTCT GTCTTAACCA AGTTTGGTGA GACAAAGGTA
CTCTGTAATG TCACTATCCA ACCAGGAGTA CCCAAATTTT TGGCAGATAC AGGCCAGGGT
TGGTTAACTG CAGAATACAG AATGTTACCA GCTGCAACTT CCGAACGTCA ACAACGGGAA
TTTATGAAAT TATCTGGGCG AACTCAAGAA ATTCAAAGGT TAATTGGACG CAGTTTAAGA
GCTGCTCTAG ATATGAATTT ATTAGGGGAA CGTACTATAA TAGTAGATGC CGATGTTTTG
CAAGCAGATG CAGGTACTCG CACTGTTTCT ATTACTGGAG GATTCGTGGC AGTAGCAAAT
GCTATTAGCA AGTTGATAGA CCAGGGAAAG TTGGAGCGAT CGCCTATTTT GCATCAAGTT
GCTGCTGTAT CAGTAGGGTT ATTAGAAAAA GAACCTTATT TAGATTTGAA TTATCCTGAA
GATGTCGCCG CAGAAATTGA TTTTAACGTG GTGATGAATG ACCAACCTGC TTTAATTGAG
GTTCAGGGAA CAGCAGAAAT AGGTAGCTTT AGTCGTACTC AACTTAATCA AATTTTAGAT
TTAGCAGAAG CAGGAATTAA AAAATTATTT GATGCCCAAC GTCAAGTTAT CTCTTGA
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| Protein sequence | MSWQRPDGRK SNQLRPISFE LDYTKFATSS VLTKFGETKV LCNVTIQPGV PKFLADTGQG
WLTAEYRMLP AATSERQQRE FMKLSGRTQE IQRLIGRSLR AALDMNLLGE RTIIVDADVL
QADAGTRTVS ITGGFVAVAN AISKLIDQGK LERSPILHQV AAVSVGLLEK EPYLDLNYPE
DVAAEIDFNV VMNDQPALIE VQGTAEIGSF SRTQLNQILD LAEAGIKKLF DAQRQVIS
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