Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2087 |
Symbol | |
ID | 4243921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3253980 |
End bp | 3255833 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638107197 |
Product | hypothetical protein |
Protein accession | YP_721800 |
Protein GI | 113475739 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03187] DGQHR domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.500314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.260401 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAGAG GAAATATTAA TATTTATATT TATATTTATA TAAATTTTGG ATTTTTTAGC TATACATCAT TGCAAAATAT GAATAAATCT TTACAAGGAA AATCAGGAAA AGAACTCGAA CAAGAAGGAA AATGTATTTT TGAAGCTATT GGATTAGATT GTTTTAATGA TTTAGGTCAA GTACAGTTAA AAGATATAGC ACCAGAATAT CCAAACAACG AGCATCTTGA ATTTGATTAC ATGATACCTA TAGATAAAGT TTGTTTAATA GGTGAAATAA CATCAAGAGA TGAAGGAAAA ATCAATACAA AGTATAAAAA GTTTATTAAT CAAATCAATA TAATTAAAAA GTTAGAATTT TCCGATTATA TTTGGCAAAA ATTAGGTATA AAAACAGAAC ATATAAGAAA ATTTAGAAAT ATACAGTCAA TTAAAGGATT TTTCATTACT ACAACTGTAG AAGAAGGCAA TGGAGAAGGC AGAATTGATT TACCAGAAGC GAGGGATATA GTTAAATTTT ATAAATCAGA TTATATGAGA TTAAAGGAAT ATTCTGACGA TATAGGAGAA TACACTAGAA ACTATTTTTT AAATTTATTT AAAATCGATG ACGAGATAGA TAAAACTTCT ATTTCAATTG ATAAGAAATA TCATCAACTA ATTAGAAGTA CTAATAAGCA AATTAGTAAA AAAGATAATG ATGCACCTTT ATCAGATTTG TATACATTTA CTATATCCCC ATACAAGATA CTAAATATAG TTCGTGTATA TAGACAAGAT GAACTTCCTT TATTAGAGGA TAGTTCAACC TATAATTATC AAAGACCTTT AATACCCGAT AAATTAAAAA AAATCAGGGA AAATTTATTA ACAAATCCTG ATTTTATTTT CCCATCTAAT ATTTTGGTGG TTCTATCTAA AGAATGTACA TATGACGAAC GTAACGATGG TTGTTTGTAT ATTCCTAGAA AGTATGGAAG TATTTCTGTA ATTGATGGTC AACATAGATT ATTTTCTTAT GCGGATCAAA AGGTCAAATC AATTATGCAA AATGATTGTA AAATAATGGT GACAGCAGTT GATTTTAAAA CTGAGAATCA AGAAATTATT AATAAGTTTA GCGCTAAAGT ATTTCTAGAA ATCAATATGA ATCAAACAAA AGTAGAAATA ACTCATACAG ATAAAATTGC TTATGAATTG GGAAGTAAAG AGCCAAAAGT AATTGCTACA AAGATTATTG TCAATTTAAA TACTAGACAA AACTTTAAGC AATTTTTTAA TCTAACGTCG GATAAAGCAA ATAAAGGTAT TATTGATGCT GGAATAATTA TTGAGGCAAT TAAAAAAATT ACAAACATTA CAAAGATCGA ACAGTTAACA AAAGCCAAAG TTAGGAATAC TCTTTTAAAA AAAGATGGAT ATGAGAAATT ATTTGATTCA ACTATAGAAA AATTATCTGA AAAAGAAACA TTAGTAGAAA AAGGAACAGC TTTATTTGAG CGTTATTTTA ACTATATTTT TTCAACTTTT AATAGAGATG AAGATAACTT AAAAAGTAGA AATAAAACAA GAAATACTTC TTTTATTTAC TCAAAATTTT GGGGTGGTTG GATTAATTTA CTCATTATAT TTATAGAAGA AGGTTTAGAC TGGGAGGAAA TCAGACAAGA GCTTAACAAT ATCAAAAAAA ATGTTATGGC TTTGTTAGAA ATTACTGAAG CAGCATACAA TGAATCTTTG TTTCAACGAG ATCATCCTAA AATTCCAGAT GCAAGTTCTT CTCCGATAAA AATTAGAGAC TTTTTGAATA AAAATAGAAA AGAATCTTGT TCTATTCAAG ATGTTGAAAA ATAA
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Protein sequence | MYRGNINIYI YIYINFGFFS YTSLQNMNKS LQGKSGKELE QEGKCIFEAI GLDCFNDLGQ VQLKDIAPEY PNNEHLEFDY MIPIDKVCLI GEITSRDEGK INTKYKKFIN QINIIKKLEF SDYIWQKLGI KTEHIRKFRN IQSIKGFFIT TTVEEGNGEG RIDLPEARDI VKFYKSDYMR LKEYSDDIGE YTRNYFLNLF KIDDEIDKTS ISIDKKYHQL IRSTNKQISK KDNDAPLSDL YTFTISPYKI LNIVRVYRQD ELPLLEDSST YNYQRPLIPD KLKKIRENLL TNPDFIFPSN ILVVLSKECT YDERNDGCLY IPRKYGSISV IDGQHRLFSY ADQKVKSIMQ NDCKIMVTAV DFKTENQEII NKFSAKVFLE INMNQTKVEI THTDKIAYEL GSKEPKVIAT KIIVNLNTRQ NFKQFFNLTS DKANKGIIDA GIIIEAIKKI TNITKIEQLT KAKVRNTLLK KDGYEKLFDS TIEKLSEKET LVEKGTALFE RYFNYIFSTF NRDEDNLKSR NKTRNTSFIY SKFWGGWINL LIIFIEEGLD WEEIRQELNN IKKNVMALLE ITEAAYNESL FQRDHPKIPD ASSSPIKIRD FLNKNRKESC SIQDVEK
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