Gene Tery_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2065 
SymbolgatA 
ID4245713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3226722 
End bp3228179 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content40% 
IMG OID638107176 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_721779 
Protein GI113475718 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.700676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCA TTAGCGATAT CCATCAACAA TTAATCAGTA AGCAACGCTC TGCTGTAGAA 
ATTACCCAAG AAGCTCTCGA AAATATCAAC CAATTGGAGC CGAAGTTAAA AAGCTTTATC
TGTGTTACAG CAGAAAAGGC CATTGCTCAG GCCCGTCAGG TGGATGCAAA GATTGCTGCA
GGAGAGAAAA TTGGACTACT AACAGGGATT CCGATCGCTG TAAAGGATAA TATATGTACT
AGGGGTATCC CTACTACTTG TGGGTCTAAG ATTTTACAAA ACTTTATTCC CCCTTATGAA
TCTACGGTAA CTCAAAAACT TGTGGATGCT GGGGCAATAA TTTTAGGCAA GACCAATTTA
GATGAATTTG GTATGGGCAG TTCAACAGAA AATTCTGCCT ATCAAGTCAC GACTAACCCG
TGGGATAACA CTCGAGTTCC TGGTGGATCT TCGGGAGGGT CAGCAGCAGC AGTAGCATCG
GCAGAATCTG TAGTAGCATT GGGTTCAGAT ACAGGTGGGT CGATTCGTCA ACCAGCATCT
TTTTGTGGAG TGGTAGGAAT TAAGCCTACT TATGGTCTGG TTTCTCGCTA TGGGTTAGTG
GCTTATGCTT CTTCTATGGA TCAAATAGGG CCGTTGAGTA GAACTGTGAA AGATTCTGCT
ATTTTATTGC AGGCGATCGC TGGTTATGAC CCTAAAGATT CTACTAGTCT TAATGTCCCT
GTCCCAGATT ACACTAAAAA CCTCACACCT AATTTAAGAC CTAAAGGGCA AATTAGAATT
GGTCTCATTC AAGAGACTTT TGGTGATGGT TTAGACTCAT CTGTTCTTCA AGCTTTTACT
AAGGCAGTGG AACTAATGCA GGAGTTGGGG GCAGAAATTC AGGTAATTTC TTGTCCTAGA
TTTAGTTACG GTTTACCTAC TTATTATGTT ATTGCTCCAT CGGAGGCTTC GGCAAATTTA
GCCCGCTATG ATGGGGTCAA ATATGGTTTC CGTGCTAGTG AGTCGGAAAA CCTCTTGAAT
ATGTATGCTA AGACTCGTTC TGAAGGTTTT GGTTCAGAAG TTAAACGCCG AATTATGATT
GGTACTTATG CTTTATCGGC TGGATATTAT GATGCTTATT ATCTGAAAGC TCAAAAAGTT
CGGACTTTAA TTAAGGAAGA TTTTGATAAA GCTTTTGCTA AAGTAGATAT TTTGGCTTGC
CCCACTTCTC CAACTACAGC ATTTAAGCTG GGTGAAAAAA GTGATAATCC ACTGAGTATG
TATTTGTCTG ACTTAATGAC TATTCCAGTT AATTTGGCTG GTTTACCTGC TTTGAGTTTA
CCCTGTGGCT TTGATCAACA AGGGTTGCCT ATTGGTATGC AATTGATAAG TAATGTTTTG
AAAGAAGATT TACTATTTGA AGCAGCTTAT GTTTATGAAC AAGCTAATAA TTGGTATAAA
TTCCAACCTC AGCTTTAA
 
Protein sequence
MASISDIHQQ LISKQRSAVE ITQEALENIN QLEPKLKSFI CVTAEKAIAQ ARQVDAKIAA 
GEKIGLLTGI PIAVKDNICT RGIPTTCGSK ILQNFIPPYE STVTQKLVDA GAIILGKTNL
DEFGMGSSTE NSAYQVTTNP WDNTRVPGGS SGGSAAAVAS AESVVALGSD TGGSIRQPAS
FCGVVGIKPT YGLVSRYGLV AYASSMDQIG PLSRTVKDSA ILLQAIAGYD PKDSTSLNVP
VPDYTKNLTP NLRPKGQIRI GLIQETFGDG LDSSVLQAFT KAVELMQELG AEIQVISCPR
FSYGLPTYYV IAPSEASANL ARYDGVKYGF RASESENLLN MYAKTRSEGF GSEVKRRIMI
GTYALSAGYY DAYYLKAQKV RTLIKEDFDK AFAKVDILAC PTSPTTAFKL GEKSDNPLSM
YLSDLMTIPV NLAGLPALSL PCGFDQQGLP IGMQLISNVL KEDLLFEAAY VYEQANNWYK
FQPQL