| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2065 |
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| Symbol | gatA |
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| ID | 4245713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 3226722 |
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| End bp | 3228179 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638107176 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_721779 |
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| Protein GI | 113475718 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.700676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATCCA TTAGCGATAT CCATCAACAA TTAATCAGTA AGCAACGCTC TGCTGTAGAA
ATTACCCAAG AAGCTCTCGA AAATATCAAC CAATTGGAGC CGAAGTTAAA AAGCTTTATC
TGTGTTACAG CAGAAAAGGC CATTGCTCAG GCCCGTCAGG TGGATGCAAA GATTGCTGCA
GGAGAGAAAA TTGGACTACT AACAGGGATT CCGATCGCTG TAAAGGATAA TATATGTACT
AGGGGTATCC CTACTACTTG TGGGTCTAAG ATTTTACAAA ACTTTATTCC CCCTTATGAA
TCTACGGTAA CTCAAAAACT TGTGGATGCT GGGGCAATAA TTTTAGGCAA GACCAATTTA
GATGAATTTG GTATGGGCAG TTCAACAGAA AATTCTGCCT ATCAAGTCAC GACTAACCCG
TGGGATAACA CTCGAGTTCC TGGTGGATCT TCGGGAGGGT CAGCAGCAGC AGTAGCATCG
GCAGAATCTG TAGTAGCATT GGGTTCAGAT ACAGGTGGGT CGATTCGTCA ACCAGCATCT
TTTTGTGGAG TGGTAGGAAT TAAGCCTACT TATGGTCTGG TTTCTCGCTA TGGGTTAGTG
GCTTATGCTT CTTCTATGGA TCAAATAGGG CCGTTGAGTA GAACTGTGAA AGATTCTGCT
ATTTTATTGC AGGCGATCGC TGGTTATGAC CCTAAAGATT CTACTAGTCT TAATGTCCCT
GTCCCAGATT ACACTAAAAA CCTCACACCT AATTTAAGAC CTAAAGGGCA AATTAGAATT
GGTCTCATTC AAGAGACTTT TGGTGATGGT TTAGACTCAT CTGTTCTTCA AGCTTTTACT
AAGGCAGTGG AACTAATGCA GGAGTTGGGG GCAGAAATTC AGGTAATTTC TTGTCCTAGA
TTTAGTTACG GTTTACCTAC TTATTATGTT ATTGCTCCAT CGGAGGCTTC GGCAAATTTA
GCCCGCTATG ATGGGGTCAA ATATGGTTTC CGTGCTAGTG AGTCGGAAAA CCTCTTGAAT
ATGTATGCTA AGACTCGTTC TGAAGGTTTT GGTTCAGAAG TTAAACGCCG AATTATGATT
GGTACTTATG CTTTATCGGC TGGATATTAT GATGCTTATT ATCTGAAAGC TCAAAAAGTT
CGGACTTTAA TTAAGGAAGA TTTTGATAAA GCTTTTGCTA AAGTAGATAT TTTGGCTTGC
CCCACTTCTC CAACTACAGC ATTTAAGCTG GGTGAAAAAA GTGATAATCC ACTGAGTATG
TATTTGTCTG ACTTAATGAC TATTCCAGTT AATTTGGCTG GTTTACCTGC TTTGAGTTTA
CCCTGTGGCT TTGATCAACA AGGGTTGCCT ATTGGTATGC AATTGATAAG TAATGTTTTG
AAAGAAGATT TACTATTTGA AGCAGCTTAT GTTTATGAAC AAGCTAATAA TTGGTATAAA
TTCCAACCTC AGCTTTAA
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| Protein sequence | MASISDIHQQ LISKQRSAVE ITQEALENIN QLEPKLKSFI CVTAEKAIAQ ARQVDAKIAA
GEKIGLLTGI PIAVKDNICT RGIPTTCGSK ILQNFIPPYE STVTQKLVDA GAIILGKTNL
DEFGMGSSTE NSAYQVTTNP WDNTRVPGGS SGGSAAAVAS AESVVALGSD TGGSIRQPAS
FCGVVGIKPT YGLVSRYGLV AYASSMDQIG PLSRTVKDSA ILLQAIAGYD PKDSTSLNVP
VPDYTKNLTP NLRPKGQIRI GLIQETFGDG LDSSVLQAFT KAVELMQELG AEIQVISCPR
FSYGLPTYYV IAPSEASANL ARYDGVKYGF RASESENLLN MYAKTRSEGF GSEVKRRIMI
GTYALSAGYY DAYYLKAQKV RTLIKEDFDK AFAKVDILAC PTSPTTAFKL GEKSDNPLSM
YLSDLMTIPV NLAGLPALSL PCGFDQQGLP IGMQLISNVL KEDLLFEAAY VYEQANNWYK
FQPQL
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