Gene Tery_2046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2046 
Symbol 
ID4243650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3191151 
End bp3191852 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content36% 
IMG OID638107157 
Productnuclease (SNase-like) 
Protein accessionYP_721760 
Protein GI113475699 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.879712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.484882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TATCTATCAT AATCTCACTA CTATTGGCTT CATTAATAAT TCTTCCTGCA 
CACAGTGAAA CTTTAACAGG GAAAATCACA AAAATAATTG ATGGAGATAC AGTAATCGTT
GATAATCAAG GACAAAGGCT AAAAGTTCGC TTGGCCTGTA TCGATGCAAT GGAATCTAAG
GCCCCAATGG GAAAACAATC AACCAAGTTC TTACAAAAAC TAATCCCTGT GGGTACTCAA
GTCACATTAA ATGTTGTTGA TACTGATCGT TATAAAAGAC TTATAGCAGA AATATATAAA
GGGAATAATT TAGTCAATCT CCAGCTAGTA CAAGAAGGAA AAGTTGTAGT TTATCAAAAA
TATCTCAACA ATTGCCCAAA TAATTCCCAA AAACTACTGG ATGCTGAAGC ACAAGCAAAA
GCCAAAAAAA TAGGATTCTG GGGACTACCT GTGAGCGAAC AAATATATCC TTGGGACTGG
CGACGAGGCA AACGTATAAC TCAGCTTCAA CCCAATCAAG ATTCAACTAT GAATCTTCCG
TCTAGTTCTA ATTTACCAGC TTGTGTAAAA AGTGATTGTA ACTGCTCAGA TTTTTCGACT
CAAGCAGAAG CACAGGAAGT TTTTCAGGCC TTTTCTAATG ACAGATTCAA GCTTGATCGT
GATAATGATG GTGTGGCTTG TGAATTATTA CCTAATATCT AA
 
Protein sequence
MKIISIIISL LLASLIILPA HSETLTGKIT KIIDGDTVIV DNQGQRLKVR LACIDAMESK 
APMGKQSTKF LQKLIPVGTQ VTLNVVDTDR YKRLIAEIYK GNNLVNLQLV QEGKVVVYQK
YLNNCPNNSQ KLLDAEAQAK AKKIGFWGLP VSEQIYPWDW RRGKRITQLQ PNQDSTMNLP
SSSNLPACVK SDCNCSDFST QAEAQEVFQA FSNDRFKLDR DNDGVACELL PNI