Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2046 |
Symbol | |
ID | 4243650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3191151 |
End bp | 3191852 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638107157 |
Product | nuclease (SNase-like) |
Protein accession | YP_721760 |
Protein GI | 113475699 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.879712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.484882 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTA TATCTATCAT AATCTCACTA CTATTGGCTT CATTAATAAT TCTTCCTGCA CACAGTGAAA CTTTAACAGG GAAAATCACA AAAATAATTG ATGGAGATAC AGTAATCGTT GATAATCAAG GACAAAGGCT AAAAGTTCGC TTGGCCTGTA TCGATGCAAT GGAATCTAAG GCCCCAATGG GAAAACAATC AACCAAGTTC TTACAAAAAC TAATCCCTGT GGGTACTCAA GTCACATTAA ATGTTGTTGA TACTGATCGT TATAAAAGAC TTATAGCAGA AATATATAAA GGGAATAATT TAGTCAATCT CCAGCTAGTA CAAGAAGGAA AAGTTGTAGT TTATCAAAAA TATCTCAACA ATTGCCCAAA TAATTCCCAA AAACTACTGG ATGCTGAAGC ACAAGCAAAA GCCAAAAAAA TAGGATTCTG GGGACTACCT GTGAGCGAAC AAATATATCC TTGGGACTGG CGACGAGGCA AACGTATAAC TCAGCTTCAA CCCAATCAAG ATTCAACTAT GAATCTTCCG TCTAGTTCTA ATTTACCAGC TTGTGTAAAA AGTGATTGTA ACTGCTCAGA TTTTTCGACT CAAGCAGAAG CACAGGAAGT TTTTCAGGCC TTTTCTAATG ACAGATTCAA GCTTGATCGT GATAATGATG GTGTGGCTTG TGAATTATTA CCTAATATCT AA
|
Protein sequence | MKIISIIISL LLASLIILPA HSETLTGKIT KIIDGDTVIV DNQGQRLKVR LACIDAMESK APMGKQSTKF LQKLIPVGTQ VTLNVVDTDR YKRLIAEIYK GNNLVNLQLV QEGKVVVYQK YLNNCPNNSQ KLLDAEAQAK AKKIGFWGLP VSEQIYPWDW RRGKRITQLQ PNQDSTMNLP SSSNLPACVK SDCNCSDFST QAEAQEVFQA FSNDRFKLDR DNDGVACELL PNI
|
| |