Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2043 |
Symbol | |
ID | 4243647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3184954 |
End bp | 3185778 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638107155 |
Product | farnesyl-diphosphate farnesyltransferase |
Protein accession | YP_721758 |
Protein GI | 113475697 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.259973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.118858 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATAC CCAAAGATAA AGATGCCCTA GAGATACTAA AAGAAACTAG CCGAACTTTT TATATTCCTA TTAGTCAATT ACCATCTGGC CTAAAAGAGG CAGTAGCATC GGCTTATCTT TGTATGCGTG CCATTGACGA AATTGAGGAT CATCGAGATC TAGATAACTT CACAAAGGCA AAATTATTAC GAAAGATTAG TTTGGCTTTA CAGGAAGCAG TTGACCATTC TAGTTTCCTT AACTTTTCAG AAAAATTAGA CCTGAATATT AGTCACCTAC CAGAAGTAAC AAAAAGAGTA GGAGAATGGG CTATACTGGC TTCAGCCACC ATAGCACCTA GGATTTGGGG TGAAACTGCA GCAATGGCAG ACCGGATGGC TTATTGGGCC GAAAATAATT GGACCATCCA CACCGAATCA GATTTGGATC GTTACACTTT TAGTGTGGCT GGTGCAGTAG GTTTATTACT TTCCGATTTA TGGGGTTGGT ATGATAATAC TCAGACTAAC CGTACTCAGG CAATTGGGTT TGGGCGAGGT CTACAGGCAG TAAATATTCT CCGTAACCAT TCAGAAGATT TAGTTAGGGG CGTAGATTTT TTTCCTTATG GTTGGAGTGC AAAAAATATG CAAGCTTATG CTCAACGTAA TCTTTTACTG GCTGATTCTT ATACTAATTC TCTTCCTTCA GGACCAGCAA GAAATTTTTG TCAAATTCCT CTTACCCTTG CTCATGCAAC TCTAGATATT TTAACAATGG GGCAAGAAAA GCTGACTCGT TCAGAAGTGA TGAAATTAAT TTCTCGCTGC AATAATTCTG TTTAA
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Protein sequence | MNIPKDKDAL EILKETSRTF YIPISQLPSG LKEAVASAYL CMRAIDEIED HRDLDNFTKA KLLRKISLAL QEAVDHSSFL NFSEKLDLNI SHLPEVTKRV GEWAILASAT IAPRIWGETA AMADRMAYWA ENNWTIHTES DLDRYTFSVA GAVGLLLSDL WGWYDNTQTN RTQAIGFGRG LQAVNILRNH SEDLVRGVDF FPYGWSAKNM QAYAQRNLLL ADSYTNSLPS GPARNFCQIP LTLAHATLDI LTMGQEKLTR SEVMKLISRC NNSV
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