Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2034 |
Symbol | |
ID | 4243638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3165641 |
End bp | 3169732 |
Gene Length | 4092 bp |
Protein Length | 1363 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638107148 |
Product | RTX toxins and related Ca2+-binding protein |
Protein accession | YP_721751 |
Protein GI | 113475690 |
COG category | [R] General function prediction only |
COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.055815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.277467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGT TTATTTCTGA TACAGAAAGT AGTGCTCATG GTGAAGAAGG TAATGACCTA GAACCTAAAG ACCTAAGTAT AGATACTGAT AAGACAGTCG ACAGTGATGA AGGGGACGAC GATAGCAAAG AAGAAACGAG TGCTGAAGGC AATGAACCAG CCCCCGCTGT AGAAGAAAGC GACACTCAGG AAGGAGAAGA AGGAAACAAT ACCGACTCTG GTGAAGATGC TGATGAGACA GTCGACAGTG ATGAAGGAGA TGACGACAGC GAAGAAGAAA CGAGTGCTGA AGGCAATGAC CCAACCCTCG CTGCTGAAGA AAGTGACACT CAGGAAGGAG AAGAAGGAAA CGATACCGAC TCTGGTGCTG GTGAAGATGC TGATGAGACA GTCGACAGTG ATGAAGGGGA CGACGATAGC AAAGAAGAAA CGAGTGCTGA AGGCAATGAA CCAGCCCCCG CTGTAGAAGA AAGCAACACC GAAGAAGGAG AAGAAGGAAA CAATACCGGC TCTGGTGAAG ATGCTGATGA GACAGTTAAC AGTGATGAAG GGGACGACGA TAGCAAAGAA GAAATGAGCG CTGACGGTAA TGACCCAGCC CCGGCTACAG AAGAAAGCGA TACCCAGAAA GGAGAAGGAG AGAATGAGCG CCTCATTATT TCTGGAACTG AAGGTAATGA TAGACTGCTT GGTGTTGAAG TTAATGAAGA GATCAAAGGA AAAGCCGGCG ATGATAAACT TTTCGGTGGT GGTGGAGATG ACCTAGTCCT AGGCGGAGAA GGAAAAGACT TCCTCCGAGG AGATGGAGGA CATGATACCC TCTCTGGTGG AGAAGGTGAT GATATCATTG ATGGTGGTGA TGGAGATGAC GACATCAAAG GAGAAGCAGG TGATGATAAA CTTTTTGGTG GTAAAGGTAA TGACTTAGTC TCGGGTAAAG AAGGAAATGA CTTGCTCCGA GGAGATGGAG GAACTGATAC CCTCACAGGT GGAGAGGGTG ATGACATCAT TAACGGTGGT GCGGATAACG ACGATATCAA AGGAGAAGCA GGTGATGATA AACTTTTCGG TGGTGATGGA GATGACCTAG TCTCTGGTGC AGAAGGAAAC GATCTACTGA AAGGAGATGG AGGAACTGAT ACCCTCACAG GTGGAGAGGG TGATGACATC ATTGCTGGTG GTGATGGAGA TGACGAAATC AAAGGAGAAG CCGATAATGA TAAACTTTTT GCTGGTGATG GAGATGACCT AGTCTCTGGT GGAGAAGGAA ACGATCTACT GAAAGGAGAT GGAGGAACTG ATACCCTCAC AGGTGGAGAG GGTGATGACA TCATTGCTGG TGGTGATGGA GATGACGACA TCAAAGGAGA AGCCGATAAT GATAAACTTT TTGCTGGTGA TGGAGATGAC CTAGTCTCGG GTGGAGAAGG AAACGATCTA CTGACAGGAG ATGGAGGAAC TGATACCCTC ACAGGTGGAG AGGGTGATGA CATCATTAAC GGTGGTGCGG ATAACGACGA TATCAAAGGA GAAGCAGGTG ATGATAAACT TTTCGGTGGT GATGGAGATG ACCTAGTCTC TGGTGCAGAA GGAAACGATC TACTGAAAGG AGATGGAGGA ACTGATACCC TCACAGGTGG AGAGGGTGAT GACATCATTG CTGGTGGTGA TGGGGATGAT GACATCAAAG GAGAAGCCGA TAATGATAAA CTTTTTGCTG GTGATGGAGA TGACCTAGTC TCGGGTGGAG AAGGAAACGA TCTACTGACA GGAGATGGAG GAACTGATAC CCTCACAGGT GGAGAGGGTG ATGACATCAT TAACGGTGGT GCGGATAACG ACGATATCAA AGGAGAAGCA GGTGATGATA AACTTTTCGG TGGTGATGGA GATGACCTAG TCTCTGGTGC AGAAGGAAAC GATCTACTGA AAGGAGATGG AGGAACTGAT ACCCTCACAG GTGGAGAGGG TGATGACATC ATTGCTGGTG GTGATGGGGA TGATGACATC AAAGGAGAAG CCGATAATGA TAAACTTTTT GCTGGTGATG GAGATGACCT AGTCTCGGGT GGAGAAGGAA ACGATCTACT GACAGGAGAT GGAGGAACTG ATACCCTCAC AGGTGGAGAG GGTGATGACA TCATTAACGG TGGTGCGGAT AACGACGATA TCAAAGGAGA AGCAGGTGAT GATAAACTTT TCGGTGGTGA TGGAGATGAC CTAGTCTCTG GTGCAGAAGG AAACGATCTA CTGAAAGGAG ATGGAGGAAC TGATACCCTC ACAGGTGGAG AGGGTAATGA CATCATTGCT GGTGGTGATG GGGATGATGA CATCAAAGGA GAAGCCGATG ATGATAAACT TTTCGGTGGT AAAGGTAATG ACTTAGTTTC GGGTGGAGAA GGAAACGATT TACTCCGAGG AGATGGAGGA AACGATACCC TCTCTGGTGG AGAGGGTGAT GATATCATTG CTGGTGGTGA AGGTAATGAC GAAATCAAAG GAGAAACCGG TAATAATCAA CTTTTTGCTG GTGAAGGTAA TGACCTAGTC TCAAGTGCAG AAGGAAACGA TTTACTCCGA GGAGATGGAG GAGCTGATAC CCTCACCGCT GGAGAAGGTG ATGATACCAT TGACGGTGGT GCGGATAACG ACGATATCAA AGGAGAAGCA GGTGATGATA AACTTTTCGG TGGTGATGGA GATGACACAG TCTTAGGTGC AGAAGGAAAC GATTTACTCC GAGGAGATGG AGGAAACGAT ACCCTCTCTG GTGGAGAGGG TGATGATATC ATTGCTGGTG GTGATGGAGA CGACGAAATC AAAGGAGAAA CCGGTAATAA TAAACTTTTT GCTGGTGAAG GCAATGACCT AGTCTCAAGT GCAGAAGGAA ACGATTTACT CCGAGGAGAT GGAGGAGCTG ATACCCTCAC CGCTGGAGAA GGTGATGATA CTATTGACGG TGGTGCGGAC AACGACGATA TCAAAGGAGA AGCAGGTGAT GATCAACTTT TTGGTGGTGA TGGAGATGAC ATAGTCTTAG GTGCAGAAGG AAACGATTTA CTCCGAGGAG ATGGAGGAAA CGATACCCTC ACTGGTGGAG AGGGTGATGA CATCATTGCT GGTGGTGAAG GTAATGACGA AATCAAAGGA GAAACCGGTA ATAATCAACT TTTTGCTGGT AAAGGTAATG ACCTAGTCTC AAGTGCAGAA GGAAACGATT TACTCCGAGG AGATGAAGGA AATGATACTC TCACTGCTGG AGGTGGTGAT GATAAACTTT TTGGTGGTGA TGGGGATGAT GAGCTCACAG GAGAAGCAGG TGATGATCAA CTTTTTGCTG CTGAAGGTAA TGACCTAATT TCAGGTGGAG AAGGAAACGA TCTGCTGAAA GGAGAAGGAG GAAATGATAC CCTCTCTGGT GGTGAAGGTG ATGATACAAT TTTTGGTTGT CATGGGAGTG ATGAGATCAA AGGAGATGCA GGTGATGACC TCATCATTAG TTATAGTGAT GCAGGAGAAC CAGATATTGC CCAAGATACA GATCAACCTA AGGTTTATTC CGAGCAACCC TTTCTTGAAG CTCATGATAC TTTAACTGGA GGAACAGGGG CTGATACTTT TGAGTTTAAA CTGTTAATTA ATGCCAAAGA CAATATTATT CAAAAACACG CCGATCCTGT AACTGGTAAA ATCAACTGGC AAGGAGTCGC TGGCGAAAAT GATAACCCCC ATGATCACTG GGTTGATGCT ATTGGTAATG ATGTCATCCT TGACTTTAAT AAAAGTGAAG GGGATAAAAT TCAGATTTTA GGTCATACTG TACAAGTCAG GGAGATTGAA AATCTTGACG ATGGAAATGG ATCTATTATT CACTTAATTA GTAATCAAGG TGGTAATGGT GGAGCCCACG ACCAAGATGA ACTAGGAACA ATTACTGTTT ATGGTGATCT AGTTGAACAG TCGGACTTAA CTGTCCGCGC TGGAGTTACC TTTGGGGTTC TTCACTCCAT CCCGATCAGT GAGATTAATG CTGAACAAAT AGCAACGCCT ATGTCGAACT CTACGCATCT GGGTGACTGT GGGTGTTGCT GA
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Protein sequence | MAKFISDTES SAHGEEGNDL EPKDLSIDTD KTVDSDEGDD DSKEETSAEG NEPAPAVEES DTQEGEEGNN TDSGEDADET VDSDEGDDDS EEETSAEGND PTLAAEESDT QEGEEGNDTD SGAGEDADET VDSDEGDDDS KEETSAEGNE PAPAVEESNT EEGEEGNNTG SGEDADETVN SDEGDDDSKE EMSADGNDPA PATEESDTQK GEGENERLII SGTEGNDRLL GVEVNEEIKG KAGDDKLFGG GGDDLVLGGE GKDFLRGDGG HDTLSGGEGD DIIDGGDGDD DIKGEAGDDK LFGGKGNDLV SGKEGNDLLR GDGGTDTLTG GEGDDIINGG ADNDDIKGEA GDDKLFGGDG DDLVSGAEGN DLLKGDGGTD TLTGGEGDDI IAGGDGDDEI KGEADNDKLF AGDGDDLVSG GEGNDLLKGD GGTDTLTGGE GDDIIAGGDG DDDIKGEADN DKLFAGDGDD LVSGGEGNDL LTGDGGTDTL TGGEGDDIIN GGADNDDIKG EAGDDKLFGG DGDDLVSGAE GNDLLKGDGG TDTLTGGEGD DIIAGGDGDD DIKGEADNDK LFAGDGDDLV SGGEGNDLLT GDGGTDTLTG GEGDDIINGG ADNDDIKGEA GDDKLFGGDG DDLVSGAEGN DLLKGDGGTD TLTGGEGDDI IAGGDGDDDI KGEADNDKLF AGDGDDLVSG GEGNDLLTGD GGTDTLTGGE GDDIINGGAD NDDIKGEAGD DKLFGGDGDD LVSGAEGNDL LKGDGGTDTL TGGEGNDIIA GGDGDDDIKG EADDDKLFGG KGNDLVSGGE GNDLLRGDGG NDTLSGGEGD DIIAGGEGND EIKGETGNNQ LFAGEGNDLV SSAEGNDLLR GDGGADTLTA GEGDDTIDGG ADNDDIKGEA GDDKLFGGDG DDTVLGAEGN DLLRGDGGND TLSGGEGDDI IAGGDGDDEI KGETGNNKLF AGEGNDLVSS AEGNDLLRGD GGADTLTAGE GDDTIDGGAD NDDIKGEAGD DQLFGGDGDD IVLGAEGNDL LRGDGGNDTL TGGEGDDIIA GGEGNDEIKG ETGNNQLFAG KGNDLVSSAE GNDLLRGDEG NDTLTAGGGD DKLFGGDGDD ELTGEAGDDQ LFAAEGNDLI SGGEGNDLLK GEGGNDTLSG GEGDDTIFGC HGSDEIKGDA GDDLIISYSD AGEPDIAQDT DQPKVYSEQP FLEAHDTLTG GTGADTFEFK LLINAKDNII QKHADPVTGK INWQGVAGEN DNPHDHWVDA IGNDVILDFN KSEGDKIQIL GHTVQVREIE NLDDGNGSII HLISNQGGNG GAHDQDELGT ITVYGDLVEQ SDLTVRAGVT FGVLHSIPIS EINAEQIATP MSNSTHLGDC GCC
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