| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2033 |
|---|
| Symbol | |
|---|
| ID | 4243637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 3162986 |
|---|
| End bp | 3165187 |
|---|
| Gene Length | 2202 bp |
|---|
| Protein Length | 733 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638107147 |
|---|
| Product | WD-40 repeat-containing serine/threonin protein kinase |
|---|
| Protein accession | YP_721750 |
|---|
| Protein GI | 113475689 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase
[COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0914422 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTATT GCTTTAACCT AAATTGCCAA AAGCCTCAGA ATCCCAACGA TGTCAAATTT
TGCCAAAATT GTGGTTCAAA GTTGTTACTG CGAGGACATT ATCAAGGAAT AAAACCTATT
GGCAATGGCA GCTTTGGTAG AACTTTATTG GCAGTAGATT TAGATAGATT TAATACTCCT
TGTGTTGTTA AACAATTGGC TCCAAAAAAT AATAATTTAC TTTCTAATAA TAAAGTATTA
GAGTTGTTTA AAAGAGAGGC AAAACAATTA CTAAAATTAG GTAAGCATCC CCAAATTCCT
ACTTTTTATG CTTATTTTGA AGAAGATGAA AACCTTTACT TGGTAGAAGA ATTAATTACT
GGAAAAAATC TATTACAAGA ATTGGAATCA GAGGGTGCGT TTAGTGAGAA AAAAATATGG
AAAATTTTAT ATGAAATATT GCCTTTACTA AAATTTATTC ACGAAAATAA AGTAATACAT
AGAGATATAA AACCAGAAAA TATATTACGA GTTGATGGGG TAAATTCACT AAAAGTAGGA
GAAAACCAAA AAGATCAATT AGTGTTAATA GATTTTGGTG TTTCTAAGTT CAGTAGTGAG
GTTGATTATG ATAAAATAGG TACTATTACT GGTACATTAG GATACTCGCC AATAGAACAA
ATAAGGGGTG GCAAAGCATA TCCAGCTAGC GACCTTTATA GTTTAGGTAT GACTTGTATT
CATTTACTGA CTGAAGTACC ACCAAATCAA CTTTTTGATT CGTTTAGTGG AGAATTAATC
TGGCGATCGC ATCTAATTAA AAAAGGGAAA AATATTAGCG ATCGTCTCGG AAAAATATTA
GATAAGTTAG TCAAAGATTT AGTCAAAGAA AGGTATCAAT CAGCTACAGA GGTACTGATA
GAAATTGCTA TAGTTTCTAC TCAAAATGAT AACCAAATAC CTCAAATTAA CCAATTAAAT
TTATCAGAAA AAAAATATTT AGAAAAATCA CAAAAATTTC AAAAAAATCC GCAGAAGGAG
TCTCCTGTTG ATGTGATTTT ACAGGTAGAA ATTAATAGCT GTAAAAATCA AAAAAAATTA
TCAGAATTAG GAGATTATAG GCTAAAAGAA AGATATAGTA ATAATGGGGA TAGTTACCAA
GAAATTACAG AAAAACTATC ATATAATCAC TATCTTCAGT ATAACTCTAA ATTACTAGAT
AATGTGATAG AATTTGAACA TAAAAAAGCT AACTTTGTTC CGAAAAAAAC AAAAATTAGA
AACTATGTAG AACTCTCTCA GCTATGGAAA ACTGTACAAA TTATTAAAGA TAATACTGCT
CCTATAAATA CCATAGCTAT AGATACCCAA GATTTGATTT TAGTAAGTGG CAGTGATGAC
AAAAAAATTA GGTTATGGAA TCTGCAAACA GGACAACTTT TGCATAAGTT TTTAGGTCAT
ACTGCTGAAG TTTATGCAAT AGCTATTAGT GTTGATGGCA GAAGAATTAT TAGCGCTGGA
GATGATAGAA CAATATTAGT TTGGAATCTA CAGAAAAAAA CAATTGCAGA TAGATTTTAT
AGCTATTCTG GTTCTCCTTA TAGTCATCGC TATGGTGCTA TTTTTTCAGT GGCTATTAGT
CCGAATTGTG AAACTATAGC GAGTGGAAGT GCTGACCAAA CAGTTAAAAT TTGGAATCAA
CGTAATGGAG AATTACTATA TAAATTACAT GAACATTTAG ACAGGGTGTT TTGTGTAACT
TATAGCAAAG TCAACAATAT TTGTACAGAA AAAAATTCTA ATGACATTTT GGCTAGTTGT
AGTGCTGATG GTGCTATCAA GATTTGGCAG GTAGGTTGTT GTCAAAGTCT GAGAACATTA
AGGGGGCATT CTGGGGATGT TTATTCAGTT GCTTTTAGTT CTGATGGTAA GGCGATCGCT
AGTGGTGGTG AGGATAAAAC GATTAGATTA TGGGATGTTG GTACGGGTGA GTTAGTAAAT
ATTTTTGAGG GTCATTCTCG AGCAGTTTTG TCTGTTGCTA TTAGTCCAGA TGATCAAATT
CTTGCTAGTG GGAGTATTGA TGGTACGGTT AAGTTATGGA ATTTGCGGAC TGGGAAGTTA
TTGGATAGTC TTTGTGGTTA TCATCCGGTG CAGTTTAGTC CGAATGGTAA AATTTTGGTT
AGTGGGGGGG AAGAAGGTCG AATATTAATT TGGAGATTCT AG
|
|---|
| Protein sequence | MSYCFNLNCQ KPQNPNDVKF CQNCGSKLLL RGHYQGIKPI GNGSFGRTLL AVDLDRFNTP
CVVKQLAPKN NNLLSNNKVL ELFKREAKQL LKLGKHPQIP TFYAYFEEDE NLYLVEELIT
GKNLLQELES EGAFSEKKIW KILYEILPLL KFIHENKVIH RDIKPENILR VDGVNSLKVG
ENQKDQLVLI DFGVSKFSSE VDYDKIGTIT GTLGYSPIEQ IRGGKAYPAS DLYSLGMTCI
HLLTEVPPNQ LFDSFSGELI WRSHLIKKGK NISDRLGKIL DKLVKDLVKE RYQSATEVLI
EIAIVSTQND NQIPQINQLN LSEKKYLEKS QKFQKNPQKE SPVDVILQVE INSCKNQKKL
SELGDYRLKE RYSNNGDSYQ EITEKLSYNH YLQYNSKLLD NVIEFEHKKA NFVPKKTKIR
NYVELSQLWK TVQIIKDNTA PINTIAIDTQ DLILVSGSDD KKIRLWNLQT GQLLHKFLGH
TAEVYAIAIS VDGRRIISAG DDRTILVWNL QKKTIADRFY SYSGSPYSHR YGAIFSVAIS
PNCETIASGS ADQTVKIWNQ RNGELLYKLH EHLDRVFCVT YSKVNNICTE KNSNDILASC
SADGAIKIWQ VGCCQSLRTL RGHSGDVYSV AFSSDGKAIA SGGEDKTIRL WDVGTGELVN
IFEGHSRAVL SVAISPDDQI LASGSIDGTV KLWNLRTGKL LDSLCGYHPV QFSPNGKILV
SGGEEGRILI WRF
|
|---|
| |