Gene Tery_2026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2026 
Symbol 
ID4243630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3153509 
End bp3154303 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content40% 
IMG OID638107143 
ProductRNA-directed DNA polymerase 
Protein accessionYP_721746 
Protein GI113475685 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.119153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACC AAATTTGTGT CAATCCTAAC CTTAAATGGA GGGATATAGA CTGGAAAAAA 
GTTGAGCGGT ATGTGTTTAA GTTACAAAAG TTAATCTATA AAGCATCCAG CCGTGGCAAA
ATCCGCAAAA TGCGTAAATA CCAAAAACTT CTGACCAAAA GTTATGATGC TAGGTTGCTA
GCTGTTAGGC GTGTGACTCA GGAAAACCAG GGGAAGAAAA CTGTGGGTAT AGATGGTATA
AAAAGTCTTC CCCCAATGCA GAGATTTAAC TTGGTAGAAA TGTTAAAGTC ACGATATCTT
AAAGCAAGCC CTACCCGTAG AGTCTGGATA CCAAAACCAG GGAAAGAAGA AAAACGTCCA
TTAAGCATAC CTACTTTGTA TGATAGGGCC CTTCAAGCAC TGGTAAAGTT AGGTAGGTCA
CCAGAATGGG AGGCCCTTTT TGAACCTAAT AGTTATGGTC TTTTCCGGAG GTCAACATAC
GATGCTATTG CAGCAATCTA TGACAGCATC AACAAAAAAC CAAAATACGT TTTAGATGCT
GACATATCCA AATGTTTTGA CCGAATTAAC CATGATGCGT TGTTGAGAAA AGTAGGACGA
ACACCTTACA GACGATTAAT CAAACAATGG TTAAAGTCCG GGGTATTTGA TAACAAACAT
TTCTCAGAAA CTATGGAAGG TACACCACAG GGAGGGGTTA TATCACCCTT ACTAGCAAAC
ATCGCCTTAC ACGGGGAAAG AAAAATGTCT AGAAAAATAT GCCGAAACCC TTCCGGGAGT
AAAGGCAAAA AATAA
 
Protein sequence
MLDQICVNPN LKWRDIDWKK VERYVFKLQK LIYKASSRGK IRKMRKYQKL LTKSYDARLL 
AVRRVTQENQ GKKTVGIDGI KSLPPMQRFN LVEMLKSRYL KASPTRRVWI PKPGKEEKRP
LSIPTLYDRA LQALVKLGRS PEWEALFEPN SYGLFRRSTY DAIAAIYDSI NKKPKYVLDA
DISKCFDRIN HDALLRKVGR TPYRRLIKQW LKSGVFDNKH FSETMEGTPQ GGVISPLLAN
IALHGERKMS RKICRNPSGS KGKK