Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2026 |
Symbol | |
ID | 4243630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3153509 |
End bp | 3154303 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638107143 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_721746 |
Protein GI | 113475685 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.119153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGACC AAATTTGTGT CAATCCTAAC CTTAAATGGA GGGATATAGA CTGGAAAAAA GTTGAGCGGT ATGTGTTTAA GTTACAAAAG TTAATCTATA AAGCATCCAG CCGTGGCAAA ATCCGCAAAA TGCGTAAATA CCAAAAACTT CTGACCAAAA GTTATGATGC TAGGTTGCTA GCTGTTAGGC GTGTGACTCA GGAAAACCAG GGGAAGAAAA CTGTGGGTAT AGATGGTATA AAAAGTCTTC CCCCAATGCA GAGATTTAAC TTGGTAGAAA TGTTAAAGTC ACGATATCTT AAAGCAAGCC CTACCCGTAG AGTCTGGATA CCAAAACCAG GGAAAGAAGA AAAACGTCCA TTAAGCATAC CTACTTTGTA TGATAGGGCC CTTCAAGCAC TGGTAAAGTT AGGTAGGTCA CCAGAATGGG AGGCCCTTTT TGAACCTAAT AGTTATGGTC TTTTCCGGAG GTCAACATAC GATGCTATTG CAGCAATCTA TGACAGCATC AACAAAAAAC CAAAATACGT TTTAGATGCT GACATATCCA AATGTTTTGA CCGAATTAAC CATGATGCGT TGTTGAGAAA AGTAGGACGA ACACCTTACA GACGATTAAT CAAACAATGG TTAAAGTCCG GGGTATTTGA TAACAAACAT TTCTCAGAAA CTATGGAAGG TACACCACAG GGAGGGGTTA TATCACCCTT ACTAGCAAAC ATCGCCTTAC ACGGGGAAAG AAAAATGTCT AGAAAAATAT GCCGAAACCC TTCCGGGAGT AAAGGCAAAA AATAA
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Protein sequence | MLDQICVNPN LKWRDIDWKK VERYVFKLQK LIYKASSRGK IRKMRKYQKL LTKSYDARLL AVRRVTQENQ GKKTVGIDGI KSLPPMQRFN LVEMLKSRYL KASPTRRVWI PKPGKEEKRP LSIPTLYDRA LQALVKLGRS PEWEALFEPN SYGLFRRSTY DAIAAIYDSI NKKPKYVLDA DISKCFDRIN HDALLRKVGR TPYRRLIKQW LKSGVFDNKH FSETMEGTPQ GGVISPLLAN IALHGERKMS RKICRNPSGS KGKK
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