Gene Tery_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2001 
Symbol 
ID4243428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3118053 
End bp3118829 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content42% 
IMG OID638107116 
ProductABC transporter related 
Protein accessionYP_721723 
Protein GI113475662 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAG CAGAAACACA AAAAACTGAA ACACCAATGG ATACTAATAT AGGAATTATT 
GCTACAGATG TCCAGAAATG GTACAGCAAT AATTTTCATG TTCTCCGTGG AGTAAGTCTC
ACGGTAAAAC CTGGGGAAGT AGTAGTAATT ATGGGGCCGA GTGGTTCTGG TAAATCGACT
TTTATCCGTA CTTTTAATGC TTTAGAGGAA TTTCAAAAGG GTAGTATTAT TGTTGATGGT
ATTAATTTAT CCCACGATTT GAAAAATATT GAGGCTATTC GACGAGAAGT GGGGATGGTA
TTTCAGCAGT TTAATTTATT TCCTCACCTC ACAGTTTTAC AAAATGTTAC TTTAGCTCCT
ATCTGGGTCC GTCGATGGCC AAAGGTGAAG GCGGAAGAGG TGGCAATGCA ACTTTTGGAA
AGAGTTGATA TTTTGGAACA GGCGAAAAAA TTTCCTGGTC AACTTTCGGG AGGTCAGCAA
CAAAGGGTGG CGATCGCTCG TGCTTTAGCG ATGCAACCCA AAATTATGTT ATTTGATGAA
CCAACTTCAG CATTAGACCC GGAGATGGTA CGGGAAGTTT TGGATGTTAT GCGTAGTTTA
GCAGACTCGG GAATGACTAT GGTAGTGGTG ACTCATGAGG TAGGGTTTGC TAGGGAGGTA
GCAGATCGAA TTGTTTTGAT GGCGGATGGG TTATTGGTAG AGGAGGCGAC TCCAGATGAG
TTTTTCCAAA ACCCTAAGGA GGAGCGTACC CGCAAGTTTT TGTCACAGAT ATTGTAG
 
Protein sequence
MTQAETQKTE TPMDTNIGII ATDVQKWYSN NFHVLRGVSL TVKPGEVVVI MGPSGSGKST 
FIRTFNALEE FQKGSIIVDG INLSHDLKNI EAIRREVGMV FQQFNLFPHL TVLQNVTLAP
IWVRRWPKVK AEEVAMQLLE RVDILEQAKK FPGQLSGGQQ QRVAIARALA MQPKIMLFDE
PTSALDPEMV REVLDVMRSL ADSGMTMVVV THEVGFAREV ADRIVLMADG LLVEEATPDE
FFQNPKEERT RKFLSQIL