| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1999 |
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| Symbol | |
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| ID | 4243426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 3114067 |
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| End bp | 3115233 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638107114 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_721721 |
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| Protein GI | 113475660 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.584111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGACG ACAAAAATCA AAAAATTCCC CTATGGCGAG ATGATAGATT TTGGCGTGTT
GCCTTGCAAG TTTTAGCTAT CATAATTTTT GTTGTGGTTG TATTTATAAT GATTAGTAAC
CTCAGCCGCA ATTTAGCACA ACAAGGCACA AGGTTTGGCT TCAGTTTTCT AGACAATGAA
GCTGCATTTA GTATTAGTGA AAGTTTGATT CCTTACGAAG CAAGTGACCC CTATATTCAA
GTATTATTAG CAGGTTTATT TAATTCTCTG CGAGTAATGA TTTTAGGAAT TTTCTTGACA
ACAATACTGG GAATAGTAGC AGGTATCGCT AGTTTTTCTG AGAATTGGTT ACTCCGGAAT
TTGAATCGAG TTTATGTGGA AGTTGTTAGA AATACTCCCC TATTATTACA GTTATTTTTT
TGGTATTTTG CCGTTTTTTT CAATCTACCA TTACCTCAAG AAAAATTAGA ATTACCAGGA
CCAATATTTA TGAGTAAACG AGGAATAGCT ATTCCTTGGC CGGAAAATAC TGTTAATGTT
TGGTTATGGT TAATAGTTTT ATTTTTAGGA GCGATCGCTG CTATATTTAT TTGGCAATGG
CGGAATAAAT TAATGACAGA AAAAGCAGCA TCTGGTCAAC CACAACTTAT AGCTATAATT
ACCATAGGAA TTATGGAGCT ATTAATTATT ATATTTGCTT TGGGTTGGCA AGCACCTATA
GCAACAGAAA CAGGAGGTAC AAAAGGAGGA TTAAATTTAA CACTAGAAAT CTCAGCTTTA
CTAGTAGGAT TAGTATTTTA TACGGGTGCT TTTATTGCTG AAATTGTTCG TTCTGGGATT
CAAGCAGTGC CAAAAGGGCA ATGGGAAGCA GCTAAATCTT TAGGATTAAA GCCTGGTTTA
GTAATGAGGT TAGTTATTTT TCCTCAAGCA TTACGGGTTA TGATTCCATC ATTAAATAGT
CAATATATGA ATTTAGCTAA AAACTCTAGT TTAGCAATAG CTATTGGTTA TCCAGATTTA
TATGCTGTAG CTAATACTAC TTATAATCAA ACAGGTCGTC CTATAGAAGT ATTTATTTTA
ATTATGGTGG TTTATCTTTC CATAAATTTG ATAATTTCTC TATCTATGAA TTTTTTGAAT
AAAAGTGTTC AATTAAAAGA AAGATAA
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| Protein sequence | MIDDKNQKIP LWRDDRFWRV ALQVLAIIIF VVVVFIMISN LSRNLAQQGT RFGFSFLDNE
AAFSISESLI PYEASDPYIQ VLLAGLFNSL RVMILGIFLT TILGIVAGIA SFSENWLLRN
LNRVYVEVVR NTPLLLQLFF WYFAVFFNLP LPQEKLELPG PIFMSKRGIA IPWPENTVNV
WLWLIVLFLG AIAAIFIWQW RNKLMTEKAA SGQPQLIAII TIGIMELLII IFALGWQAPI
ATETGGTKGG LNLTLEISAL LVGLVFYTGA FIAEIVRSGI QAVPKGQWEA AKSLGLKPGL
VMRLVIFPQA LRVMIPSLNS QYMNLAKNSS LAIAIGYPDL YAVANTTYNQ TGRPIEVFIL
IMVVYLSINL IISLSMNFLN KSVQLKER
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