Gene Tery_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1953 
Symbol 
ID4244377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3027869 
End bp3028264 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content34% 
IMG OID638107072 
Productferric uptake regulator family protein 
Protein accessionYP_721679 
Protein GI113475618 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00726041 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACCA AGCGCACCCA TTCTCAAGAA CGTATTTTAA AATTACTAAA AAACCAGAAG 
CGATCGCTAT CTGCTCAAGA TATTTATTTA AAACTACGCA GATATGACAG ACCTCTGGGG
CTAGCAACAA TATATCGTTC TTTGGATGCT CTCAAAAAAG AGGGTGTAGT AATTGTTCGG
ACTTTGGTCA ATGGTGAATC TGTTTATAGT TGTCTACAGC AAGACCAATA TTATTTGAAT
TGTGTTAAAT GTGGGACTTC TATACCTATT AATAAATGTC CTGTCTACAA TTTGGAGGAT
AAATTACAGC AGTCCTACAA ATTTAAGATT TTTTACCATA CTTTGGAATT TTTTGGGCTT
TGTGAACGCT GTACCTTAAC TGAAGATATT TCTTAA
 
Protein sequence
MKTKRTHSQE RILKLLKNQK RSLSAQDIYL KLRRYDRPLG LATIYRSLDA LKKEGVVIVR 
TLVNGESVYS CLQQDQYYLN CVKCGTSIPI NKCPVYNLED KLQQSYKFKI FYHTLEFFGL
CERCTLTEDI S