Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1952 |
Symbol | |
ID | 4244376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3026642 |
End bp | 3027607 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638107071 |
Product | SPFH domain-containing protein/band 7 family protein |
Protein accession | YP_721678 |
Protein GI | 113475617 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.664065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0256055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAGT TTTTTTTACT TGTATTTTTA GTTTTAGGTG GTTCAAGTTT AGCAGGAAGT GTCAAAGTTA TTAATCAAGG CAATGAAGCT TTGGTTGAAA CTTTAGGTAG ATATAACGGC AGAAAATTAG ATGCTGGTTT GAAACTTATT ATACCATTTT TAGATAAAAT TTCTTATCAA GAAACTATTC GTGAAAAAGT ATTAGATATT AAACCTCAAC CATGTATTAC TAGAGATAAT GTAGCAATTA GTGTAGATGC TGTAGTTTAT TGGCGAATTA TGGATATGGA GAAAGCTTAC TATAAAGTAG AAAATCTCCA ATCTGCAATG ACTAATTTAG TTTTAACTCA AATTCGGGCA GAAATGGGTA AATTAGAATT AGACCAAACT TTTACAGCTC GCACGGAAAT TAATGAGGTA TTACTCAGAG AATTAGACAT TGCTACTGAC CCTTGGGGAG TAAAAGTAAC TAGGGTAGAG TTACGAGATA TTAGCCCATC AAAAGCAGTA CAAGATTCTA TGGAATTACA AATGACTGCA GAACGAAAAA AACGGGCAGC AATTTTAACT TCAGAAGGGG AAAGAGATTC TGCTATTAAC TCTGCCAGAG GTAGAGCAGA ATCACAAGTT CTTGATGCTC AAGCACGTCA AAAGGCAACT GTTTTAGAAG CAGAAGCACA ACAAAAAGCA ATTGTCTTGA AGGCTCAAGC TGAACGTCAA TCTCAGGTAT TGAAAGCTCA AGCAACTGCT GAAGCATTAG AAATTATTAC TAAGACTCTC CGTAAAGACC CCAATGCAAA GGAGGCACTC GAATTTTTAT TGGCTCAAAA TTATCTGGAT ATGGGTCAAA AAATTGGTAC TAGTGAAAGT AGTAAAGTTA TGTTTATGGA CCCTCGAAAT ATTCCAGCAA CTTTAGAAGG TATGCGTTCT ATTGTGACAG ACAACAAAAA TTCAGTGAGC ATTTAG
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Protein sequence | MQQFFLLVFL VLGGSSLAGS VKVINQGNEA LVETLGRYNG RKLDAGLKLI IPFLDKISYQ ETIREKVLDI KPQPCITRDN VAISVDAVVY WRIMDMEKAY YKVENLQSAM TNLVLTQIRA EMGKLELDQT FTARTEINEV LLRELDIATD PWGVKVTRVE LRDISPSKAV QDSMELQMTA ERKKRAAILT SEGERDSAIN SARGRAESQV LDAQARQKAT VLEAEAQQKA IVLKAQAERQ SQVLKAQATA EALEIITKTL RKDPNAKEAL EFLLAQNYLD MGQKIGTSES SKVMFMDPRN IPATLEGMRS IVTDNKNSVS I
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