Gene Tery_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1946 
Symbol 
ID4244370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3016554 
End bp3017336 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content37% 
IMG OID638107066 
Producthypothetical protein 
Protein accessionYP_721673 
Protein GI113475612 
COG category[R] General function prediction only 
COG ID[COG3694] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0246863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAT ACTTACAAGT ACTAAAATTA TTTTGGAGTG CAGCTATTGC GGCTGAATTA 
GAATACCGTT TCAACTTTAT GATCGCAGCC ATTAGCAGCA TAGGAGGTTT ACTAGGTAGC
TTATTTAGTT TACTTCTATT CTATAGAACA GGCTACAAAT TTCAAGGTTG GAATTGGGAA
GAATCTTTAA TTATCCTAGC AATTTTTACC ATTTTACAGG GTCTTTCAGC AACTTTTTTG
ATTCCTAGTT TAAACCGAAT TGTGAAGCAG GTACAAGAAG GTACCCTAGA TTTTGTCCTT
CTCAAACCCA TTAGTAGTCA ATTTTTGCTT TCTACTCGCA CAATTTCTCC CTGGGGAATA
CTAGACATAA TTTTTGGCGG GTTCCTCTTA GAATATGCCG GTAGTAAACT TGGTTTAGGA
ATAAGCAATT ATTTGCTTAC CATACTTCCA ATGGTCTGTG GGATAATTAT TCTTTATAGT
ATCTGGTTTA TCCTGGGCTC TACCAGTATT TGGTTTGTCA AAATTTATAA CTTAACAGAA
GTCCTCAGAG GTTTATTAGG AGCAGGAAGA TATCCAATAG TAGCTTACCC TACTGCTTAT
CGTTTCTTCT TCACTTTTCT AGTACCAGTG GCATTTTTAA CTACTGTACC AGCTCAAACC
ATATTAGGTA AGGCTGGAAG TACTTGGATA TTGGGTTCTT TTGTTTTAGC AGGCGGATTA
TTTTTTGCCT CTATTCAATT TTGGCGACTC GCTCTGCGCT ATTATACAAG TGCTTCTAGT
TAA
 
Protein sequence
MKRYLQVLKL FWSAAIAAEL EYRFNFMIAA ISSIGGLLGS LFSLLLFYRT GYKFQGWNWE 
ESLIILAIFT ILQGLSATFL IPSLNRIVKQ VQEGTLDFVL LKPISSQFLL STRTISPWGI
LDIIFGGFLL EYAGSKLGLG ISNYLLTILP MVCGIIILYS IWFILGSTSI WFVKIYNLTE
VLRGLLGAGR YPIVAYPTAY RFFFTFLVPV AFLTTVPAQT ILGKAGSTWI LGSFVLAGGL
FFASIQFWRL ALRYYTSASS