Gene Tery_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1940 
Symbol 
ID4244364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3006413 
End bp3007297 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content33% 
IMG OID638107061 
ProductPfkB 
Protein accessionYP_721668 
Protein GI113475607 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.123547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0238447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA CAGGACTATT TGTTGGATTA ATTACCTTAG ATTTAGTTTA TCTCACAGCA 
ACTTATCCCG ATAATAATCA AAAAGTTGTT GCTGCTAATT ATGCTGTTAC TGCCGGAGGT
CCTGCCACAA ATGCAGCAGT AACATTTAGC TACTTTAATA ATCAAACAAC TCTTATCGGT
GTGTTAGGAA ATCATCCGAT AACTCATCTA ATTAAAGCAG ATTTAGAAAA GCATAATGTG
AGAATACAAG ACTTAGATAA AAATCGTTCT GAACCACCAC CAGTTTCATC AATAATTACT
ACTCAAGATA CAGGCGATCG TGCTGTTATT TCTATCAATG CTACTAAGTC TCAAATCTCA
AAAGAATTAA TTAGCTCAGA AATTCTTCAC AACATTGATA TTGTCTTAAT TGACGGTCAT
CAAATGGCAG CAAGTCTAGA AATTGCTCAA CTTGCTAAGT CAAAAAATAT TCCTATTGTT
ATAGATGGAG GTAGTTGGAA ACTAGGGTTT GAGGAAATTT TACCTTTTGT TGATTATGCT
ATTTGTTCGG CTAATTTTTA TCCTCCTAAT TGTGAAAGTC AAGAGGAAGT TTTTGAATAT
TTAGCAAGTC AAAATATCCG GCATATTGCC ATAACCCAAG GGGAAAAATC TATCAAATAT
TTGAATAAGG GTAAGTTTGG TAATATAGCA ATTCCCAAAG TTAATGTTGT TGATACTTTA
GGTGCAGGTG ATATTTTTCA TGGAGCATTT TGTCACTATA TTTTTGATGG AGAATTTACA
GAAGCTTTGA GAAATGCTGC TAATATTGCT GCTCATTCTT GTCAATATTT CGGTACTAGG
AATTTATTTT TGGTAGGGGA AAATCCGGAT TTATCTCAGG ATTAA
 
Protein sequence
MTKTGLFVGL ITLDLVYLTA TYPDNNQKVV AANYAVTAGG PATNAAVTFS YFNNQTTLIG 
VLGNHPITHL IKADLEKHNV RIQDLDKNRS EPPPVSSIIT TQDTGDRAVI SINATKSQIS
KELISSEILH NIDIVLIDGH QMAASLEIAQ LAKSKNIPIV IDGGSWKLGF EEILPFVDYA
ICSANFYPPN CESQEEVFEY LASQNIRHIA ITQGEKSIKY LNKGKFGNIA IPKVNVVDTL
GAGDIFHGAF CHYIFDGEFT EALRNAANIA AHSCQYFGTR NLFLVGENPD LSQD