Gene Tery_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1924 
Symbol 
ID4242673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2979022 
End bp2980677 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content36% 
IMG OID638107045 
Productpolysaccharide export protein 
Protein accessionYP_721652 
Protein GI113475591 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0359634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC AAGAATCAAT AAATAAAGAA GATATCTTTA GCCGAAAATT ATCTTTATCC 
CAGGTTTTAA GTTGTGGAAT AATAGTTATA TTATGCATTT TTTGGGAAGT TTCATATTCG
GCACTTGCTC ACACCCTACT CCAGGAAGAC CAAACATTAT CAGAAACCTC AACCTTACCA
AAACTAAGAG AATCTTGGTC TAAAGAGCAA GAACCACAAC CAACTCTATT AAATCTACCT
CCAGAACTAA TACTGATTCC TGAAACAGAA ACACCTTTAA GTGTTTCAAA AGAGTACACA
CTTGGTCCTG GTGATCACGT TCAAATAGAT GTTTTTAATA TACCAGAATA TAGTGGACAA
AATGGGCAAC ATCAAGTACA AATTGATGGG ACTCTTAATC TACCATTAAT AGGTAAGGTT
TATGTTCAGG GAAGGACCTT GGAAAAAGCC AAAGGGTTAA TTGAAGAAAA ATATGGTGAG
TATTTACAAA TACCTATAGT TAACCTTAAC TTATTAGCTG CACGTCCATT AAGAATAGCG
ATCGCTGGAG AAGTTCAATA TCCCGGTTCA TACACAATTT CGCCTATAGT AAGTCTTGGG
GGTAGTAGTA AAAGTGGGAC TCAAATGCCT ACAGTTACTA AAGCATTACA GGTAGCAGGT
GGAGTAACAA CTTCAGCAGA TATTAGACAA ATCAAAATTC GTCGTTTCCA ACTCAACGCC
CCAGAAGAAC TAATCAATAT TAATCTATGG GAACTTTTGC AAAGTGGCAA CTTAGTTCAA
GATATTTTTT TGCTGGATGG GGATACCTTA TTTGTACCTA GTATTGCAGA AATTAACCCG
GTAGAGTTAA CTCAACTAGC AAGTGCTAAC TTTGCTGGTA CTAATAATAA ACCTCTCAAA
ATTGCGGTGG TTGGAGAAGT AGCACGCCCT GGCCCATATA TACTAGAAAC AGATATTGAC
CAAAGTCAAG TTTTGCCTAC AGCAGAGAAA TCAGACTCTA GTGAAGCAGA TAGCAATATT
TCACTCCGTC AGAATACTAG GCTGCATACT GTGACTAAAG CAATTAAAAT GGCGGGGGGT
ATTACTTTAA GTGCAGATAT TAAAGAAATT AAGGTGCGCC GACTAACTCG CGCTGGAGAG
AAGCAAATTA TTAAAGTAAA TCTTTGGGAA CTGCTGCAAA GTGGTGATTT AAGTCAAGAT
ATAGTCTTAC AGACAGGGGA TACAATTTAT GTGCCAGTAG CAAATGAAGT TGATTTAGAT
GAATTAGCTG AAGTTACGAC TTCAAGTTTT TCTCTAGGTC AGCTCAAAAT TAATGTTATT
GGGGAAGTAG TTAAACCAGG AACAATATTG ATAGATCCTA ATAGTACACT TAATCAAGCT
TTGTTGGCAG CAGGAGGTTT TAATCCATCA AGGGCAGAAA CAAAAGAAAT AGAACTTATT
CGCCTTAACC CTAATGGTAC AGTTACTCGA CGAAAAGTGC AAGTAGATTT TTCGGCAAAA
GCTAATGAAG AAACAAATCC AGCTTTATTG CATAATGATG TAATTGTAGT TGGTCGTTCT
AGTAGGGCAG CCTTTAGTGA TAATATAGGA GGTGTTTTAG CTCCTTTTAA TCCAATTAAT
AGAATTTTAG GGATATTTTT TGATATTTTT GATTGA
 
Protein sequence
MKQQESINKE DIFSRKLSLS QVLSCGIIVI LCIFWEVSYS ALAHTLLQED QTLSETSTLP 
KLRESWSKEQ EPQPTLLNLP PELILIPETE TPLSVSKEYT LGPGDHVQID VFNIPEYSGQ
NGQHQVQIDG TLNLPLIGKV YVQGRTLEKA KGLIEEKYGE YLQIPIVNLN LLAARPLRIA
IAGEVQYPGS YTISPIVSLG GSSKSGTQMP TVTKALQVAG GVTTSADIRQ IKIRRFQLNA
PEELININLW ELLQSGNLVQ DIFLLDGDTL FVPSIAEINP VELTQLASAN FAGTNNKPLK
IAVVGEVARP GPYILETDID QSQVLPTAEK SDSSEADSNI SLRQNTRLHT VTKAIKMAGG
ITLSADIKEI KVRRLTRAGE KQIIKVNLWE LLQSGDLSQD IVLQTGDTIY VPVANEVDLD
ELAEVTTSSF SLGQLKINVI GEVVKPGTIL IDPNSTLNQA LLAAGGFNPS RAETKEIELI
RLNPNGTVTR RKVQVDFSAK ANEETNPALL HNDVIVVGRS SRAAFSDNIG GVLAPFNPIN
RILGIFFDIF D