Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1924 |
Symbol | |
ID | 4242673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 2979022 |
End bp | 2980677 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638107045 |
Product | polysaccharide export protein |
Protein accession | YP_721652 |
Protein GI | 113475591 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0359634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAC AAGAATCAAT AAATAAAGAA GATATCTTTA GCCGAAAATT ATCTTTATCC CAGGTTTTAA GTTGTGGAAT AATAGTTATA TTATGCATTT TTTGGGAAGT TTCATATTCG GCACTTGCTC ACACCCTACT CCAGGAAGAC CAAACATTAT CAGAAACCTC AACCTTACCA AAACTAAGAG AATCTTGGTC TAAAGAGCAA GAACCACAAC CAACTCTATT AAATCTACCT CCAGAACTAA TACTGATTCC TGAAACAGAA ACACCTTTAA GTGTTTCAAA AGAGTACACA CTTGGTCCTG GTGATCACGT TCAAATAGAT GTTTTTAATA TACCAGAATA TAGTGGACAA AATGGGCAAC ATCAAGTACA AATTGATGGG ACTCTTAATC TACCATTAAT AGGTAAGGTT TATGTTCAGG GAAGGACCTT GGAAAAAGCC AAAGGGTTAA TTGAAGAAAA ATATGGTGAG TATTTACAAA TACCTATAGT TAACCTTAAC TTATTAGCTG CACGTCCATT AAGAATAGCG ATCGCTGGAG AAGTTCAATA TCCCGGTTCA TACACAATTT CGCCTATAGT AAGTCTTGGG GGTAGTAGTA AAAGTGGGAC TCAAATGCCT ACAGTTACTA AAGCATTACA GGTAGCAGGT GGAGTAACAA CTTCAGCAGA TATTAGACAA ATCAAAATTC GTCGTTTCCA ACTCAACGCC CCAGAAGAAC TAATCAATAT TAATCTATGG GAACTTTTGC AAAGTGGCAA CTTAGTTCAA GATATTTTTT TGCTGGATGG GGATACCTTA TTTGTACCTA GTATTGCAGA AATTAACCCG GTAGAGTTAA CTCAACTAGC AAGTGCTAAC TTTGCTGGTA CTAATAATAA ACCTCTCAAA ATTGCGGTGG TTGGAGAAGT AGCACGCCCT GGCCCATATA TACTAGAAAC AGATATTGAC CAAAGTCAAG TTTTGCCTAC AGCAGAGAAA TCAGACTCTA GTGAAGCAGA TAGCAATATT TCACTCCGTC AGAATACTAG GCTGCATACT GTGACTAAAG CAATTAAAAT GGCGGGGGGT ATTACTTTAA GTGCAGATAT TAAAGAAATT AAGGTGCGCC GACTAACTCG CGCTGGAGAG AAGCAAATTA TTAAAGTAAA TCTTTGGGAA CTGCTGCAAA GTGGTGATTT AAGTCAAGAT ATAGTCTTAC AGACAGGGGA TACAATTTAT GTGCCAGTAG CAAATGAAGT TGATTTAGAT GAATTAGCTG AAGTTACGAC TTCAAGTTTT TCTCTAGGTC AGCTCAAAAT TAATGTTATT GGGGAAGTAG TTAAACCAGG AACAATATTG ATAGATCCTA ATAGTACACT TAATCAAGCT TTGTTGGCAG CAGGAGGTTT TAATCCATCA AGGGCAGAAA CAAAAGAAAT AGAACTTATT CGCCTTAACC CTAATGGTAC AGTTACTCGA CGAAAAGTGC AAGTAGATTT TTCGGCAAAA GCTAATGAAG AAACAAATCC AGCTTTATTG CATAATGATG TAATTGTAGT TGGTCGTTCT AGTAGGGCAG CCTTTAGTGA TAATATAGGA GGTGTTTTAG CTCCTTTTAA TCCAATTAAT AGAATTTTAG GGATATTTTT TGATATTTTT GATTGA
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Protein sequence | MKQQESINKE DIFSRKLSLS QVLSCGIIVI LCIFWEVSYS ALAHTLLQED QTLSETSTLP KLRESWSKEQ EPQPTLLNLP PELILIPETE TPLSVSKEYT LGPGDHVQID VFNIPEYSGQ NGQHQVQIDG TLNLPLIGKV YVQGRTLEKA KGLIEEKYGE YLQIPIVNLN LLAARPLRIA IAGEVQYPGS YTISPIVSLG GSSKSGTQMP TVTKALQVAG GVTTSADIRQ IKIRRFQLNA PEELININLW ELLQSGNLVQ DIFLLDGDTL FVPSIAEINP VELTQLASAN FAGTNNKPLK IAVVGEVARP GPYILETDID QSQVLPTAEK SDSSEADSNI SLRQNTRLHT VTKAIKMAGG ITLSADIKEI KVRRLTRAGE KQIIKVNLWE LLQSGDLSQD IVLQTGDTIY VPVANEVDLD ELAEVTTSSF SLGQLKINVI GEVVKPGTIL IDPNSTLNQA LLAAGGFNPS RAETKEIELI RLNPNGTVTR RKVQVDFSAK ANEETNPALL HNDVIVVGRS SRAAFSDNIG GVLAPFNPIN RILGIFFDIF D
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