Gene Tery_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1909 
Symbol 
ID4242658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2957064 
End bp2957879 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content36% 
IMG OID638107030 
Producttransposase, IS605 OrfB 
Protein accessionYP_721637 
Protein GI113475576 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0424273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.280923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCAAA AAGCATACAA ATTTAGATTT TATCCAACTC CAGAGCAGGA AATTCTGTTG 
CTGAGGATTT TGGGTTGTAT ACACCTCATC TACAACAAAG CTTTAGCAAC TAGAACTCAA
GCTTGGCATG AACACCCAGA AAGAGTGAGC TATAAACAAA CTTCAGCTAT ATTGACTTCT
TGGAAAAAAC CGGAATATTT AAGTTTTCTC CCTGAAGTAA GCAGTGTAGT ATTACAGCAA
AGCTTAAGAT ATTTAAAAAC GGCTTCTAAT AACCTTTTTA GTGGACATAC TAAATATCCT
AATTCCAAGA AAAAAAGAAA TGTTGGTAGT GCTACGTTTA CAAAGTCAGC CTTCAAATGT
AAAGATGGTC AAGTCTATTT AGCTAAGTAT GCAGAACAAT TATATATTAG ATGGAGCAGG
CAATTACTAC TAGGTTGTAT ACCCAGTACG ATAGCAATAA GTGATGCTAA TTGGGGAGAA
TTAGTGAAGC AATTAGAATA CAAAGCTCAA TGGTATAGTC GTACATTAAT AAAAATTGAC
AGATATTTTC CTAGTTCTAA ACGTTACTCT AATTGTATTC ATATAGTAGA AAAATTATCT
TTAAATATTA GACAATGGGA CTGTCCTGAA AGCGCTAGTC ACCATGATAG TTATCTAAAC
GCAAGTATAA ACATTTTGGC TACCGGACAG GCAGTGTCAG TCTGGGTCGC GACTGTAAGA
CCTGAAGAGA GTAAATCTCG GAGGGCAAGT ACGATGAAGC AGAAAGCCCT TAATATTGAT
GAATTGGGAA TTTTCCGCAA ATGTCTTGTA GGATAA
 
Protein sequence
MVQKAYKFRF YPTPEQEILL LRILGCIHLI YNKALATRTQ AWHEHPERVS YKQTSAILTS 
WKKPEYLSFL PEVSSVVLQQ SLRYLKTASN NLFSGHTKYP NSKKKRNVGS ATFTKSAFKC
KDGQVYLAKY AEQLYIRWSR QLLLGCIPST IAISDANWGE LVKQLEYKAQ WYSRTLIKID
RYFPSSKRYS NCIHIVEKLS LNIRQWDCPE SASHHDSYLN ASINILATGQ AVSVWVATVR
PEESKSRRAS TMKQKALNID ELGIFRKCLV G