Gene Tery_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1907 
Symbol 
ID4242655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2954960 
End bp2955835 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content38% 
IMG OID638107027 
Productpeptidase M48, Ste24p 
Protein accessionYP_721635 
Protein GI113475574 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.271345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTAA CAAAAACACA ACTAATTGGT TTAAAAGCAA ATCATTTTCG GCATCCCTTA 
GATCTAGAGG CAACAAATGC TTTGAAGCAA CTTCCTGGTA TAGACCTCTT AGTTAGACAG
TTGTTAAGTC CATTAGGTGA GCAATTTTTC TATATGGAAA ATATTGCTTC CAGTGTTCTC
GTCAGTGAAG CACAACTGCC AAATTTACAC AAAACACTAT TAGACGCTTG TCAAGCACTT
GACATAGAAC CACCCCAATT ATATATTCGT CAAAATCCTG TACCTAATGC TTATACATTT
GCTATGCGAG GGAAGCAACC TTTTATTGTT GTTCATACAT CTCTAATAGA GTTGCTCAAC
TTAGAGGAGA TCCAAGCAGT ATTAGGTCAT GAGCTAGGAC ATCTTAAATG TGAGCATGGA
GTATATCTTA CCCTAGGTAA CTTAATTGTA CTTGCTGCTG GACAAATTTC GACATGGGGT
GGCATAATAG CCCAAAGCTT ACAAAGCAAA ATACTAGAAT GGCTAAGATG TGCCGAATTT
AGTTGTGATC GCGCAGCCCT ACTGGCCACA CAAAATTCTC AAGTAGTTGT ATCAGCTTTG
ATGAAGTTAG CTGGTGGTTC TCCAACAATA TCACCTCAAC TTAATGTAGA TGCTTTTTTA
GCTCAGGCAA GAGCTTATAA TGAACTTAGT AATACAGAAG TTGGTGAAGT ATTAAAGGAA
GTCCAAACGG CTCAACTAAC TCATCCTCTA CCTGTATTGA GGGCCAAAGA AATTGATATG
TGGGCAAGTA GCAAAAAATA TCAGGATATA TTGCAAAATT TAGCAAAAGA TGTGTATAAT
AATCAAAGGA TTAAGGGCGG GTGGCGAAAT TGGTAG
 
Protein sequence
MALTKTQLIG LKANHFRHPL DLEATNALKQ LPGIDLLVRQ LLSPLGEQFF YMENIASSVL 
VSEAQLPNLH KTLLDACQAL DIEPPQLYIR QNPVPNAYTF AMRGKQPFIV VHTSLIELLN
LEEIQAVLGH ELGHLKCEHG VYLTLGNLIV LAAGQISTWG GIIAQSLQSK ILEWLRCAEF
SCDRAALLAT QNSQVVVSAL MKLAGGSPTI SPQLNVDAFL AQARAYNELS NTEVGEVLKE
VQTAQLTHPL PVLRAKEIDM WASSKKYQDI LQNLAKDVYN NQRIKGGWRN W