| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1884 |
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| Symbol | |
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| ID | 4242689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 2878439 |
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| End bp | 2880205 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638107005 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_721613 |
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| Protein GI | 113475552 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0760067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGCAG TTTCTAGCAA TAACTATAAC GATGAAAAAT TTATCCCCTC TTTTGATGAA
TTTACTGGAG TTGTCTATTT TGAAAATATT AAGACGCAAG TAAGTTGCAC AGGGGCTTTA
CTAGATAGTA ATGGCCTTTA TATTTTGACG GCTGCCCATT GCTTTAATAA GCAGAATGAT
TCGGCAAACT TAAATCCTAA CCCTAATAAT TATAAAGTCT TTTTTGAAGT TAATGGTACT
CTTAAATCAA GACTTGTCGA AGAGATTTTT GTTCATCCTG AGTGGACATC TGATGAAAAT
AGTAATAACG ATATTGCTAT CATTAAACTC TCTAATGAAG CGCCTGATGT TGAGAGCTAC
GATATATATC GTGATACTGA TGAGGTGGAT CAGGTTTTTA CCCGTGTGGG TTACGGTTTC
CCTGGAACTG GTAGAGACGG TCAGATTGAT GATTCAGGAG AAGACCCCCC TGTCAAGCGT
TTTGGACAAA ATTATTATGA TGCCTTGGGT GAGATTTTCA ATGATTATGA TTATGATACT
CCAATAATAA AAGGTACACA GCTAGCCTTC GACTTTGATA ATGGGAAACC AAGGAGGGAT
GCTTTTGGTC GTGAATACGG TTTGGATCAG TTGGGAGTGG ATCAAGAGGT TAATTCTACA
GCAGGAGATT CAGGGGGTCC GGCCTTTATT GATGGGAAAA TAGCTGGGAT CACATCCTAT
GGTTTTTCTT CAGGTATGTA TGATACAGAT GTAGATGATG AAAGTGGTAA TTCTAATTTC
GGAGAATACA GTGTTGATAT CAGGGTTTCA GCTTATATAG AATTTATTAC AGACATTACA
TCCTTATCAC TTGAGGGAAG TAGGGGTGAT GATACTATAA AAGGAGGTAT TGGTAACGAT
ACTATTAATG GAGCTTCTGG TCAAGATAGA CTTTTGGGAA AATCTGGCAA TGACTTCTTA
GTAGGTAGCT TTGGTAATGA TGCTTTGTTA GGGGAAGCAG GTGATGATAT TCTAAAAGGC
GGTGGGGGTC GCGATCGCTT GAACGGTGGT ACTGGCAACG ATACACTTAC TGGTGATGGA
GGTAATGACC GCCTCAACGG TAGTGGAGGT AATGACCGCC TCAACGGTAA TACTGGCAAC
GATATACTTA CTGGTGGTGG AGGTAATGAC CGCCTCAACG GTGGTGGAGG TAATGACCGC
CTCAACGGTA ATACTGGCAA CGATATACTT ACTGGTGGTG GAGGTAATGA CCGCCTCAAT
GGTGGTGGAG GTAATGACCG CCTCAATGGT AATAATGGCA ACGATATACT TACTGGTGGT
GGAGGTAATG ACCGCCTCAA CGGTGGTGGA GGTAATGACC GCCTCAACGG TGGTGCTGGA
AATGATATAC TTATTGGTGG TGGAGGTAAT GACCGTTTTA TCTTTAATAG TAATGAAAAA
TTTGACTCCA ATGATTTTGG TATTGATACT ATCAAAAATT TTGAACCAGA CCTCAGACCT
GATGAAGATG GAAGCCAAGG TGACTTAATT GTTCTTGACA AGTCAAGCTT TACTGACCTT
GGTAGTTCTA CTCGTATTGG TTTCAGTGTT GATAGTGATT TTGAAATCGT TAATACTAAT
AATAGTATAG ATGACTCTAA TGCTTTTATT GTTTACAATG AAGAGTCTGG AAATCTATTC
TACAAATCAG ATGGTGAGTA TACTAAGTTT GCTATTCTTA ATGGTGCGCC CACTATTACT
GAAGATAATT TCCAAATTAT CAATTAG
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| Protein sequence | MVAVSSNNYN DEKFIPSFDE FTGVVYFENI KTQVSCTGAL LDSNGLYILT AAHCFNKQND
SANLNPNPNN YKVFFEVNGT LKSRLVEEIF VHPEWTSDEN SNNDIAIIKL SNEAPDVESY
DIYRDTDEVD QVFTRVGYGF PGTGRDGQID DSGEDPPVKR FGQNYYDALG EIFNDYDYDT
PIIKGTQLAF DFDNGKPRRD AFGREYGLDQ LGVDQEVNST AGDSGGPAFI DGKIAGITSY
GFSSGMYDTD VDDESGNSNF GEYSVDIRVS AYIEFITDIT SLSLEGSRGD DTIKGGIGND
TINGASGQDR LLGKSGNDFL VGSFGNDALL GEAGDDILKG GGGRDRLNGG TGNDTLTGDG
GNDRLNGSGG NDRLNGNTGN DILTGGGGND RLNGGGGNDR LNGNTGNDIL TGGGGNDRLN
GGGGNDRLNG NNGNDILTGG GGNDRLNGGG GNDRLNGGAG NDILIGGGGN DRFIFNSNEK
FDSNDFGIDT IKNFEPDLRP DEDGSQGDLI VLDKSSFTDL GSSTRIGFSV DSDFEIVNTN
NSIDDSNAFI VYNEESGNLF YKSDGEYTKF AILNGAPTIT EDNFQIIN
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