| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1861 |
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| Symbol | cobD |
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| ID | 4242724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 2846024 |
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| End bp | 2847016 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638106982 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_721590 |
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| Protein GI | 113475529 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.130243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACTTATA ACTATACTTT CATTGTTATT TTTATAGCTG CTTGTCTAGA TTATTTGATT
GGCGATCCTT GGAGTTGGCC ACATCCTGTA AAAGTTATGG GATGGATAAT TACTCATTAC
ACTCAAATGA TTTTTCAACT CAGTAAAAAT TATAGAGAGA ACTTCCCTAG CTTTGTACTG
AGATTTGCTG GTATTTTACT AACAATCACT CTTGTTTTCG GTAGTGGAGT TATCAGTTGG
TTAATTGTTC AAGCTTTACG AATAAATTTT GTCCAATTTC CTTTATTAAC TGTAATATTA
GAAAGCATTC TATTAGCTAG CTGTTTTGCT GGTAAAAGTT TAAATACTGC AGCTAAAGAC
GTACTTAAAC CTGCCCTAGG TGGTAATTTA ATTCAAGCAC GCCAAAATTT AAGTTTATAT
GTAGGTAGAG ATACAGAAAA TTTATCAATT TCAGAAATAT TTCGCGCAGT TTTGGAAACA
GTCACAGAAA ATGCTACAGA TGGGGTAATA GCACCATTAT TTTATGCTTT AGTAGGAGCA
ATAATACCTG ATGTAGGCAG TATACCTTTG GCCTTTGCGT ACAAAGCTGC CAGTACATTA
GACTCAATGG TAGGCTACAA AGAAGCACCT TATACTCATA TAGGATGGTT TAGTGCCAAA
CTAGAAGATA TTTTAACCTG GTTACCTTGT CGCTTAAATG TATTGACTAT AGCGTTCCTC
TCTGGCAAAC CTCTATATGT TTGCAAAATA TGTCAAAGGG ATGCAGTCAA AGACCCAAGT
CCTAATGCTG GTTGGAGTGA ATGTGCCTAT GCTGCAACAT TGGGAGTACA AATGGGTGGT
GCCAACTCTT ACAAGGGGAC GGTTAAATAT AAACCACTAT TGGGAGAAGC GACTCATCCA
ATTACAGCAG AAACTATTGA TCGGGCATTA CAGTTAACTC GTTACTGTTT TTTAATCTGG
TTAGGATTAT TTTTTATAAT ACTAGGCATT TAG
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| Protein sequence | MTYNYTFIVI FIAACLDYLI GDPWSWPHPV KVMGWIITHY TQMIFQLSKN YRENFPSFVL
RFAGILLTIT LVFGSGVISW LIVQALRINF VQFPLLTVIL ESILLASCFA GKSLNTAAKD
VLKPALGGNL IQARQNLSLY VGRDTENLSI SEIFRAVLET VTENATDGVI APLFYALVGA
IIPDVGSIPL AFAYKAASTL DSMVGYKEAP YTHIGWFSAK LEDILTWLPC RLNVLTIAFL
SGKPLYVCKI CQRDAVKDPS PNAGWSECAY AATLGVQMGG ANSYKGTVKY KPLLGEATHP
ITAETIDRAL QLTRYCFLIW LGLFFIILGI
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