Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1807 |
Symbol | |
ID | 4244521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 2757992 |
End bp | 2758780 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638106929 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_721537 |
Protein GI | 113475476 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.958493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00046791 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAAGTGG CAAGTGGTAA AATTAGTTTT TTAAGACCAA CTCCCTTTCA ACCAGAATTA CCTCTGTTTG TTTTCCTATG TGCTATGGAT GGTACAGGTA AATTGTTGCG ATCGCAAATC TCTAGCTTAT CAACTGGTTT CGATATTCGA TGTCTGAGTA TCCCACAAAA TGATTTATCG ACTTGGGAAC AATTATCAGA GAAAACAATA AACCTAATTA AAATTGAACA AAAAGCAGCA CCTAAAAGAC CTGTTTATTT ATGTGGAGAA TCATTTGGAG GGTGTTTAGC ACTAAAAGTT GCCTTAAATA CTCCTGAATT ATTGGACAAA CTAATTTTAG TTAATTCAGC CACTTCATTT AGCCAACAAC CTATAGTAAA ATATGGATCA TATCTCACCC AATATCTACC AAGCTATTTA TATCAATTAT CTGTAACAGC AACTCTACCC TTTTTAGGCG CTTTAGGTCG AATAAGACCA GAGGAGTGTC AAGCACTACT CAAAGCTATG CAGTCAGTTT CTCAGAAAAC AGCTATCTGG CGGTTTGAAC TAATGCGCTC ATTCCAGGTC AAGAAAAATC AACTAAAAAA TTTCCCAAAA TCTACATTAA TTATTGCCAG CGCTGCAGAC AGACTTTTAC CTTCAATATC ACAAGCTAAG TTTTTAGTCA AATATTTGCC CAAAGCTGAA ATGGTTATTC TCCCAAATAG TGGTCACGCC TGCTTACTAG AAGCAGACGT AGACCTTTAT AAAATTATTC GAGACCAATG GGGCAGTAAT TTGGTTTAA
|
Protein sequence | MQVASGKISF LRPTPFQPEL PLFVFLCAMD GTGKLLRSQI SSLSTGFDIR CLSIPQNDLS TWEQLSEKTI NLIKIEQKAA PKRPVYLCGE SFGGCLALKV ALNTPELLDK LILVNSATSF SQQPIVKYGS YLTQYLPSYL YQLSVTATLP FLGALGRIRP EECQALLKAM QSVSQKTAIW RFELMRSFQV KKNQLKNFPK STLIIASAAD RLLPSISQAK FLVKYLPKAE MVILPNSGHA CLLEADVDLY KIIRDQWGSN LV
|
| |