Gene Tery_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1793 
Symbol 
ID4243775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2738086 
End bp2739255 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content40% 
IMG OID638106917 
ProductFAD dependent oxidoreductase 
Protein accessionYP_721525 
Protein GI113475464 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.075637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATA TAGTAATTAT TGGATGTGGA GTAGTTGGAG CAACGATCGC TTATCAACTC 
AGCAAAATAG AAGGTTTAAA AATTACAGTC TTAGATAAAC AAATGCCTGC TCAAGGATCT
ACGGGTGCTG CTTTGGGTGT TTTGATGGGA GTTATTAGTC AAAAAGCTAA AGGCAGACCT
TGGAAAATGA GACGCATGAG TGTGCAAGCT TATCACAATT TAATTCCTGA GCTAGAAGCC
AAAATAAATC GCTCTATTTC TCACAACCGT CAAGGTATTT TACAGTTGTG TTTGCCTGGG
GAAGATCTCG ACAAGTGGCA AAGATTAATA AATATTCGAG AAGCAGATGA TTTGCCATTA
GAAATGTGGG ATGTAGAACG ACTAGGCGAT CGCTGCCCCC AGCTCCAAAT ATCAGAGGTG
ATAGCAGCTA TTTATTCTCC CGAAGATTTA CAAGTTAACC CTGTTGAATT AACTTTAGCT
TTAGTAGAAG CGGCTCAACA AAATGGTGTG AATTTTCATT TTGGGGTCAC AGTTGCTGAA
TATAAGACTA TTTCTCTGCC AAGAAATGAA TATCGTTGTC GCCAAGTATC TATAAAAAAT
TTGGATGAGA CAAAAAAAAC TCCTACTTTG CCAGATGTAG ACTGGTTAGT TGTTGCCGCC
GGCTTGGGTT CATTACCATG TTTACAAGGA ATAAAAGGGG GTAAGCTACG CTCTTTGCAA
CTCAAGCGCA AGTCTAATGT TGATAATAGA TTTACTCTAA TACCTGTATT AGGTCAAGCT
TTACATCTGC AAGTGTCAAC GCTTTTAGGA AAGTCAGATT TTCAACCAGT GATCACTGGG
GATGATGTGC ATATTATACC AGTAGCAGAA AATGAATATT GGGTGGGAGC AACAGTTGAA
TTTCCCAACG ATATCGGTGA GGTGGTAGCT GACTCCAGTT TATTAGATCA CGTGATGGCG
AGAGCAATTA GTTTTTGTCC GGGTTTAGCA GATGCAAATA TTCTTAGGAA ATGGTCTGGT
TTACGACCTC GTCCAGAAGG TCAAGCTGCT CCTGCAGTTG GTTATCTGGA AGGTTGGCGA
AATATATTGT TGGCAACAGG TCATTATCGG AATGGGGTGT TGTTAGCTCC AGCAACAGCA
GAGGCAGTTG AAAAAATGAT TGTCAAGTAA
 
Protein sequence
MSHIVIIGCG VVGATIAYQL SKIEGLKITV LDKQMPAQGS TGAALGVLMG VISQKAKGRP 
WKMRRMSVQA YHNLIPELEA KINRSISHNR QGILQLCLPG EDLDKWQRLI NIREADDLPL
EMWDVERLGD RCPQLQISEV IAAIYSPEDL QVNPVELTLA LVEAAQQNGV NFHFGVTVAE
YKTISLPRNE YRCRQVSIKN LDETKKTPTL PDVDWLVVAA GLGSLPCLQG IKGGKLRSLQ
LKRKSNVDNR FTLIPVLGQA LHLQVSTLLG KSDFQPVITG DDVHIIPVAE NEYWVGATVE
FPNDIGEVVA DSSLLDHVMA RAISFCPGLA DANILRKWSG LRPRPEGQAA PAVGYLEGWR
NILLATGHYR NGVLLAPATA EAVEKMIVK