Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1793 |
Symbol | |
ID | 4243775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2738086 |
End bp | 2739255 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638106917 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_721525 |
Protein GI | 113475464 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.075637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCATA TAGTAATTAT TGGATGTGGA GTAGTTGGAG CAACGATCGC TTATCAACTC AGCAAAATAG AAGGTTTAAA AATTACAGTC TTAGATAAAC AAATGCCTGC TCAAGGATCT ACGGGTGCTG CTTTGGGTGT TTTGATGGGA GTTATTAGTC AAAAAGCTAA AGGCAGACCT TGGAAAATGA GACGCATGAG TGTGCAAGCT TATCACAATT TAATTCCTGA GCTAGAAGCC AAAATAAATC GCTCTATTTC TCACAACCGT CAAGGTATTT TACAGTTGTG TTTGCCTGGG GAAGATCTCG ACAAGTGGCA AAGATTAATA AATATTCGAG AAGCAGATGA TTTGCCATTA GAAATGTGGG ATGTAGAACG ACTAGGCGAT CGCTGCCCCC AGCTCCAAAT ATCAGAGGTG ATAGCAGCTA TTTATTCTCC CGAAGATTTA CAAGTTAACC CTGTTGAATT AACTTTAGCT TTAGTAGAAG CGGCTCAACA AAATGGTGTG AATTTTCATT TTGGGGTCAC AGTTGCTGAA TATAAGACTA TTTCTCTGCC AAGAAATGAA TATCGTTGTC GCCAAGTATC TATAAAAAAT TTGGATGAGA CAAAAAAAAC TCCTACTTTG CCAGATGTAG ACTGGTTAGT TGTTGCCGCC GGCTTGGGTT CATTACCATG TTTACAAGGA ATAAAAGGGG GTAAGCTACG CTCTTTGCAA CTCAAGCGCA AGTCTAATGT TGATAATAGA TTTACTCTAA TACCTGTATT AGGTCAAGCT TTACATCTGC AAGTGTCAAC GCTTTTAGGA AAGTCAGATT TTCAACCAGT GATCACTGGG GATGATGTGC ATATTATACC AGTAGCAGAA AATGAATATT GGGTGGGAGC AACAGTTGAA TTTCCCAACG ATATCGGTGA GGTGGTAGCT GACTCCAGTT TATTAGATCA CGTGATGGCG AGAGCAATTA GTTTTTGTCC GGGTTTAGCA GATGCAAATA TTCTTAGGAA ATGGTCTGGT TTACGACCTC GTCCAGAAGG TCAAGCTGCT CCTGCAGTTG GTTATCTGGA AGGTTGGCGA AATATATTGT TGGCAACAGG TCATTATCGG AATGGGGTGT TGTTAGCTCC AGCAACAGCA GAGGCAGTTG AAAAAATGAT TGTCAAGTAA
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Protein sequence | MSHIVIIGCG VVGATIAYQL SKIEGLKITV LDKQMPAQGS TGAALGVLMG VISQKAKGRP WKMRRMSVQA YHNLIPELEA KINRSISHNR QGILQLCLPG EDLDKWQRLI NIREADDLPL EMWDVERLGD RCPQLQISEV IAAIYSPEDL QVNPVELTLA LVEAAQQNGV NFHFGVTVAE YKTISLPRNE YRCRQVSIKN LDETKKTPTL PDVDWLVVAA GLGSLPCLQG IKGGKLRSLQ LKRKSNVDNR FTLIPVLGQA LHLQVSTLLG KSDFQPVITG DDVHIIPVAE NEYWVGATVE FPNDIGEVVA DSSLLDHVMA RAISFCPGLA DANILRKWSG LRPRPEGQAA PAVGYLEGWR NILLATGHYR NGVLLAPATA EAVEKMIVK
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