Gene Tery_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1782 
Symbol 
ID4242247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2720539 
End bp2721768 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content32% 
IMG OID638106906 
Producthypothetical protein 
Protein accessionYP_721514 
Protein GI113475453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.78638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCCA ATAAATTCTT TCCCAATAAA CCTGTTCCTC CAGAGAAGTT TGTCGGTAGA 
AAATCTGAAC TATACACAAT TTTTGACCAA GTTAATAATC GTGGTCATGT GGCTATTCAT
GGTGCTTCTG GTATGGGTAA ATCATCTTTA CTCGACTATA TAAAATATCC TCATTTTTGG
GATGATAAAG GATTAAATTT TTCAGAGGCT TTGATTGTTT ATCACAACTG TGAGGGTTCA
TTTACGCCAA ATAGTTTTTG GCAAGAAATT TTACAAGAGT TAAGAAATGA AGCTGAAGGT
GATACAGATT TACAGAGTAA GATTGATGAT GTCTTAAAAT TAGAAACAAT AGAAATAAGA
GATATACGTC GAATACTTAA ACAAATTGGG AAAAGAAATA AATTTTTATT ATTATTATTA
GATGACTATA ATGGAATACT TCGTACACCA GAATATTATA GCAAAGACTA TCAAAAGTCT
AGAGAAGTAC AGACGTTTTT AAGTGGGTTG CGTAATCTGG CAGTTCATAG TACAGAAAGT
CAATATTTCT CAACAGTTGT TGCTGCATTC CAAAAAGTGG ATGAGTTAGG TCCAGAGATT
CCTCGTGGTG GTTCTCCTTG GTATAATCAT TATCTATATG TAGATTTAAA ACCTTTTAGT
CGGGAGGATA TTAATAATTA TTTTTTTAAT TCCGATAGTC ATTTCTTTAT TTCAATTCCT
GAAAATATTC AGAAAGAAAA AGTGTTAGAA ATTACTAGTG GATATCCAAT CTTACTTCAA
CAGGCAGGTT ATATATTTTC TAAACTGGAT CGAGTTATTG ATATTAATAC TTTTAAGGCA
GAACTTAAAA ATCAAACTGA ACAGATATTT AAGGATATAT GGAGAGAATT GACTACAGAC
GAACAAAAGC TTTTACAGCT CATTGTCATT GATAACTTCA AAGGAGAAGT TAATGGAAAG
CGTTATTCTC ATGATGGTAT AGATCAAGTA TTTGAGGAAA ATAAGTATAA ACTGACAACC
TTGGAGCAAA AAGGTGTTAT CTCTCAGAGC CCAGACCAGG ATAAATATAA TTTTTCTTCT
TCTTTAATGC AAGATTTAGT TCTTCAAAAA TTGGCTGAAA GTATTTGGGA CCCTAAAAAG
GGTAAAATCT TGTTTGACAG CTTTGGAACC AAGATTAACT ATGAGCAGTC CATGATTGAA
GAATTATTAG GAATAATCCC TTTTAATTAA
 
Protein sequence
MSSNKFFPNK PVPPEKFVGR KSELYTIFDQ VNNRGHVAIH GASGMGKSSL LDYIKYPHFW 
DDKGLNFSEA LIVYHNCEGS FTPNSFWQEI LQELRNEAEG DTDLQSKIDD VLKLETIEIR
DIRRILKQIG KRNKFLLLLL DDYNGILRTP EYYSKDYQKS REVQTFLSGL RNLAVHSTES
QYFSTVVAAF QKVDELGPEI PRGGSPWYNH YLYVDLKPFS REDINNYFFN SDSHFFISIP
ENIQKEKVLE ITSGYPILLQ QAGYIFSKLD RVIDINTFKA ELKNQTEQIF KDIWRELTTD
EQKLLQLIVI DNFKGEVNGK RYSHDGIDQV FEENKYKLTT LEQKGVISQS PDQDKYNFSS
SLMQDLVLQK LAESIWDPKK GKILFDSFGT KINYEQSMIE ELLGIIPFN